Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04297 and BPUM_2583

See DNA alignment / Visit BSNT_04297 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:50
# Commandline: needle
#    -asequence pep-align/BSNT_04297___ytfI.1.24716.seq
#    -bsequence pep-align/BPUM_2583___ytfI.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04297___ytfI-BPUM_2583___ytfI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04297___ytfI-BPUM_2583___ytfI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04297___ytfI
# 2: BPUM_2583___ytfI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 239
# Identity:     103/239 (43.1%)
# Similarity:   154/239 (64.4%)
# Gaps:           9/239 ( 3.8%)
# Score: 513.0
# 
#
#=======================================

BSNT_04297___      1 MLLEEVKNMVYVLTAILILIGIVLLLRMKIHVALEYLHADDNDKLTLKIT     50
                       :|||..::||..|..:.:|| ||:.||:.::|:|.||:|||.|.|||.
BPUM_2583___y      1 --MEEVSIVLYVWIAAFLFLGI-LLIFMKVTISLDYSHANDNDHLALKII     47

BSNT_04297___     51 ALFGLIRIKKTIPAIKVNKEDGTVDIKQKTESKMKKSSGKK-----KITQ     95
                     .|:|:||:||.||.::||.||.|:||::|..:..:..|.:|     |:.:
BPUM_2583___y     48 TLYGIIRLKKDIPMVRVNPEDQTIDIREKKMASAQTPSHEKESIHNKVGK     97

BSNT_04297___     96 NDVQQSINKIEMLLHQVTRLRKISASFLAHLHITKLEWVTVIGIQDAAVT    145
                     .|::|.::::|.:..::..|.:|...|..|:.|....|.|.||..|||:|
BPUM_2583___y     98 RDMKQILHQMERITKEIVDLNRIMRKFFIHMRIISFHWSTWIGFHDAALT    147

BSNT_04297___    146 GVLTGAVWGVKGGIAAMLYDHLDFVNKPVYEVIPSFQVPVSKTHFQCIFF    195
                     ||..|.||.|||.:.|.:.:||.|.:||||||||:||..||:|.|.||.:
BPUM_2583___y    148 GVAAGGVWSVKGALLAFMQEHLTFKHKPVYEVIPAFQHNVSQTQFTCIAY    197

BSNT_04297___    196 FRFGHAMLAAFKFVKYGRELSVLKKNPSARMTSKNDSSV    234
                     ||.|||||||.:.:.:..:....:|:.|.:.| ||:|||
BPUM_2583___y    198 FRIGHAMLAAIRLLVHWLKGRKARKSASLQAT-KNESSV    235


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.