Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04294 and BPUM_2580

See DNA alignment / Visit BSNT_04294 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:50
# Commandline: needle
#    -asequence pep-align/BSNT_04294___ytxK.1.24716.seq
#    -bsequence pep-align/BPUM_2580___ytxK.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04294___ytxK-BPUM_2580___ytxK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04294___ytxK-BPUM_2580___ytxK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04294___ytxK
# 2: BPUM_2580___ytxK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity:     201/333 (60.4%)
# Similarity:   257/333 (77.2%)
# Gaps:          13/333 ( 3.9%)
# Score: 1062.0
# 
#
#=======================================

BSNT_04294___      1 MQKDHVGAVYELLNEAAIMIKNELQISYIEALAEAGEMYFLEKTDQLKLP     50
                     ||||.|..::|||:.|:|.:|.|..||||||||||||.:|         .
BPUM_2580___y      1 MQKDQVSTIFELLDTASIRLKKEQSISYIEALAEAGEAFF---------Q     41

BSNT_04294___     51 ADQKTKQLQALLEKAEFGTYEHEWVRKAFQLAVLKGMKDISHPNRQMTPD    100
                     |:.:...|:.::|||:|.:|:||.:|||||||||||.|||||||||||||
BPUM_2580___y     42 ANDRDGLLKDVIEKADFASYDHEQIRKAFQLAVLKGQKDISHPNRQMTPD     91

BSNT_04294___    101 TIGLFISYLVNKFMADKKELTILDPALGTGNLLFTVLNQLSEKTANSFGI    150
                     |||||:|||||||:..:|||.:.|||.||||||..|||.|:.:|...|..
BPUM_2580___y     92 TIGLFVSYLVNKFLEGQKELVVFDPAAGTGNLLLAVLNNLTAETKRGFAS    141

BSNT_04294___    151 EIDDVLLKIAYAQANLLKKELELFHQDSLEPLFIDPVDTVICDLPVGYYP    200
                     ||||||:|||:|||||.:||:|||||||||||.|.|||..:|.|||||||
BPUM_2580___y    142 EIDDVLIKIAWAQANLEEKEVELFHQDSLEPLLISPVDVTVCSLPVGYYP    191

BSNT_04294___    201 NDEGAEAFELKADEGHSFAHHLFIEQSVKHTKPGGYLFFMIPNHLFESSQ    250
                     |||.|..:||||.|||:|||:||||||:::||.||:|||:|||.|||..:
BPUM_2580___y    192 NDERAADYELKAKEGHAFAHYLFIEQSLRYTKEGGFLFFIIPNDLFEGKE    241

BSNT_04294___    251 SGKLKQFFKDKVHINALLQLPKSIFKDEAHAKSILVLQKQGEYTKAPGQI    300
                     |.:||.|.||:.::|||:|||.|:|||:.||||:.|:||:.|..:||.::
BPUM_2580___y    242 SVQLKDFIKDQAYMNALIQLPVSMFKDKKHAKSLFVMQKKKEGLEAPKRM    291

BSNT_04294___    301 LLANLPSFSNQKAMLDMMAQFDEWFKKEK----    329
                     |.|||||||.:::|:.:|.:.|:||.:||    
BPUM_2580___y    292 LFANLPSFSQKESMVSVMRKLDQWFIEEKETKE    324


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