Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04291 and BPUM_2579
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:50
# Commandline: needle
# -asequence pep-align/BSNT_04291___ackA.1.24716.seq
# -bsequence pep-align/BPUM_2579___ackA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04291___ackA-BPUM_2579___ackA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04291___ackA-BPUM_2579___ackA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04291___ackA
# 2: BPUM_2579___ackA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 431
# Identity: 341/431 (79.1%)
# Similarity: 377/431 (87.5%)
# Gaps: 37/431 ( 8.6%)
# Score: 1790.0
#
#
#=======================================
BSNT_04291___ 1 MFKWKSQIFFGEDVDIHREKSTKNEVVDTEYKGASIMSKIIAINAGSSSL 50
||||||||||||||
BPUM_2579___a 1 ------------------------------------MSKIIAINAGSSSL 14
BSNT_04291___ 51 KFQLFEMPSETVLTKGLVERIGIADSVFTISVNGEKNTEVTDIPDHAVAV 100
|||||:||.|||||||||||||:.:|:|||||:|||.|||||||||||||
BPUM_2579___a 15 KFQLFDMPEETVLTKGLVERIGMDNSIFTISVDGEKKTEVTDIPDHAVAV 64
BSNT_04291___ 101 KMLLNKLTEFGIIKDLNEIDGIGHRVVHGGEKFSDSVLLTDETIKEIEDI 150
||||.||.||.||||.|||||:||||||||||||||||||||.|.:|:.:
BPUM_2579___a 65 KMLLEKLIEFNIIKDFNEIDGVGHRVVHGGEKFSDSVLLTDEVINDIDQL 114
BSNT_04291___ 151 SELAPLHNPANIVGIKAFKEVLPNVPAVAVFDTAFHQTMPEQSYLYSLPY 200
|||||||||||:|||||||::||:|||:||||||||||||||||||||||
BPUM_2579___a 115 SELAPLHNPANVVGIKAFKQILPDVPAIAVFDTAFHQTMPEQSYLYSLPY 164
BSNT_04291___ 201 EYYEKFGIRKYGFHGTSHKYVTERAAELLGRPLKDLRLISCHLGNGASIA 250
:||:.||||||||||||||:|||||:|||||||::|||||||||||||||
BPUM_2579___a 165 DYYKNFGIRKYGFHGTSHKFVTERASELLGRPLEELRLISCHLGNGASIA 214
BSNT_04291___ 251 AVEGGKSIDTSMGFTPLAGVAMGTRSGNIDPALIPYIMEKTGQTADEVLN 300
|||||:|||||||||||||||||||||||||||||:||||||.||:|||:
BPUM_2579___a 215 AVEGGRSIDTSMGFTPLAGVAMGTRSGNIDPALIPFIMEKTGHTAEEVLS 264
BSNT_04291___ 301 TLNKKSGLLGISGFSSDLRDIVEATKEGNERAETALEVFASRIHKYIGSY 350
||||||||||:||.|||||||.|||:|||:|||.||::||||||||||||
BPUM_2579___a 265 TLNKKSGLLGVSGLSSDLRDIEEATEEGNDRAEVALDIFASRIHKYIGSY 314
BSNT_04291___ 351 AARMSGVDAIIFTAGIGENSVEVRERVLRGLEFMGVYWDPALNNVRGEEA 400
||||:|||||||||||||||.|||.|||||||||||||||:|||:|||||
BPUM_2579___a 315 AARMNGVDAIIFTAGIGENSSEVRARVLRGLEFMGVYWDPSLNNMRGEEA 364
BSNT_04291___ 401 FISYPHSPVKVMIIPTDEEVMIARDVVRLAK 431
|||||||||||::|||:|||||||||:|||
BPUM_2579___a 365 FISYPHSPVKVIVIPTNEEVMIARDVMRLA- 394
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