Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04291 and BPUM_2579
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:50
# Commandline: needle
# -asequence dna-align/BSNT_04291___ackA.1.24716.seq
# -bsequence dna-align/BPUM_2579___ackA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04291___ackA-BPUM_2579___ackA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04291___ackA-BPUM_2579___ackA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04291___ackA
# 2: BPUM_2579___ackA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1298
# Identity: 928/1298 (71.5%)
# Similarity: 928/1298 (71.5%)
# Gaps: 115/1298 ( 8.9%)
# Score: 3580.0
#
#
#=======================================
BSNT_04291___ 1 ATGTTTAAATGGAAAAGTCAGATATTTTTCGGAGAAGATGTTGATATTCA 50
BPUM_2579___a 0 -------------------------------------------------- 0
BSNT_04291___ 51 CCGGGAAAAAAGTACGAAAAACGAAGTTGTTGATACAGAGTATAAAGGAG 100
BPUM_2579___a 0 -------------------------------------------------- 0
BSNT_04291___ 101 CGTCAATCATGTCCAAAATTATTGCAATTAACGCAGGAAGCTCGTCTTTG 150
|||||.||||||||.|||||.||||||||||||||.|||.|.
BPUM_2579___a 1 --------ATGTCTAAAATTATCGCAATCAACGCAGGAAGCTCATCTCTT 42
BSNT_04291___ 151 AAATTTCAGCTTTTCGAAATGCCTTCAGAAACCGTTTTAACGAAGGGTTT 200
|||||.||..|.|||||.|||||...|||||||||||||||.||.|||.|
BPUM_2579___a 43 AAATTCCAATTGTTCGACATGCCAGAAGAAACCGTTTTAACAAAAGGTCT 92
BSNT_04291___ 201 AGTTGAACGAATCGGTATCGCCGACAGCGTATTCACAATTTCTGTGAACG 250
.||||||.|||||||.||.|.|.||||..|.|||||.||||||||..|.|
BPUM_2579___a 93 TGTTGAAAGAATCGGAATGGACAACAGTATCTTCACGATTTCTGTAGATG 142
BSNT_04291___ 251 GCGAAAAAAATACAGAAGTAACTGATATTCCGGATCATGCGGTAGCTGTT 300
|.|||||.||.||||||||.||.||||||||.||||||||.|||||.|||
BPUM_2579___a 143 GAGAAAAGAAAACAGAAGTCACAGATATTCCAGATCATGCAGTAGCGGTT 192
BSNT_04291___ 301 AAAATGCTGC-TGAATAAGTTAACGGAATTCGGCATTATTAAAGACTTGA 349
||||||||.| |||| ||..|||..|||||...|||.||.||||||||.|
BPUM_2579___a 193 AAAATGCTACTTGAA-AAACTAATTGAATTTAACATCATCAAAGACTTTA 241
BSNT_04291___ 350 ATGAAATTGACGGAATTGGCCATCGTGTCGTTCACGGCGGAGAAAAATTC 399
|||||||||||||..|.||.||.|||||.||||||||||||||.||.|||
BPUM_2579___a 242 ATGAAATTGACGGTGTAGGACACCGTGTTGTTCACGGCGGAGAGAAGTTC 291
BSNT_04291___ 400 AGCGATTCTGTTTTATTAACGGATGAAACCATTAAGGAAATCGAAGATAT 449
|||||.||||||.|.|||||.||||||..|||.||.||.||.||..|..|
BPUM_2579___a 292 AGCGACTCTGTTCTTTTAACTGATGAAGTCATCAATGACATTGATCAGCT 341
BSNT_04291___ 450 TTCTGAATTGGCACCGCTTCACAATCCGGCAAATATCGTTGGAATTAAAG 499
||||||..|.|||||.||.|||||.||.|||||..|.||.|||||.||||
BPUM_2579___a 342 TTCTGAGCTAGCACCACTGCACAACCCTGCAAACGTTGTAGGAATCAAAG 391
BSNT_04291___ 500 CGTTCAAAGAAGTGCTTCCAAATGTTCCTGCGGTAGCTGTATTTGATACG 549
|.||||||.||.|.||.||..|.||.||.|||.|.|||||.||.|||||.
BPUM_2579___a 392 CATTCAAACAAATTCTGCCTGACGTACCAGCGATTGCTGTGTTCGATACA 441
BSNT_04291___ 550 GCATTCCACCAAACAATGCCTGAGCAGTCTTACCTGTACAGCCTGCCGTA 599
||.|||||||||||||||||.||||||||||||||.||||||||.|||||
BPUM_2579___a 442 GCCTTCCACCAAACAATGCCAGAGCAGTCTTACCTATACAGCCTTCCGTA 491
BSNT_04291___ 600 TGAATACTATGAAAAATTCGGCATCCGTAAATACGGCTTCCACGGCACTT 649
.||.|||||..||||.||.||.||.|||||||||||.||||||||.||..
BPUM_2579___a 492 CGATTACTACAAAAACTTTGGTATTCGTAAATACGGATTCCACGGGACAA 541
BSNT_04291___ 650 CACATAAATATGTAACTGAGCGTGCGGCAGAGCTTCTCGGCCGTCCGTTA 699
..|||||.|..|||||.||||||||..|||||||..|.||||||||..|.
BPUM_2579___a 542 GCCATAAGTTCGTAACAGAGCGTGCTTCAGAGCTATTAGGCCGTCCTCTT 591
BSNT_04291___ 700 AAAGA-CTTGCGCCTGATTTCCTGCCACCTTGGAAACGGAGCAAGTATTG 748
.|||| ||| ||.||||||||.||.|||||||||||.||.||.|||||.|
BPUM_2579___a 592 GAAGAGCTT-CGTCTGATTTCTTGTCACCTTGGAAATGGTGCGAGTATCG 640
BSNT_04291___ 749 CCGCTGTTGAAGGCGGAAAATCTATTGACACATCCATGGGCTTTACGCCG 798
|.||.|||||||||||||.|||.||.||.||.||.||||||||.||.||.
BPUM_2579___a 641 CAGCAGTTGAAGGCGGAAGATCAATCGATACGTCAATGGGCTTCACACCA 690
BSNT_04291___ 799 CTTGCCGGTGTAGCAATGGGCACACGCTCTGGAAACATCGACCCTGCCCT 848
|||||.|||||.||.|||||.|||||.||.||.|||||.||||||||.||
BPUM_2579___a 691 CTTGCGGGTGTTGCGATGGGTACACGTTCAGGTAACATTGACCCTGCTCT 740
BSNT_04291___ 849 GATCCCATACATCATGGAGAAAACAGGCCAAACGGCTGACGAAGTACTGA 898
.||.||||..||.||||||||||||||.||.||.|||||.||||||||..
BPUM_2579___a 741 TATTCCATTTATTATGGAGAAAACAGGACATACAGCTGAAGAAGTACTTT 790
BSNT_04291___ 899 ATACATTAAACAAAAAAAGCGGACTGCTCGGCATTTCCGGTTTCTCAAGC 948
.|||.||.||.||.||.||.||.||..|.||..|.||.|||.|.|||||.
BPUM_2579___a 791 CTACTTTGAATAAGAAGAGTGGTCTTTTAGGTGTGTCTGGTCTATCAAGT 840
BSNT_04291___ 949 GATCTTCGTGACATCGTTGAAGCAACGAAAGAAGGAAATGAGCGCGCGGA 998
|||||||||||.||||..||||||||..||||||||||.||.||.||.||
BPUM_2579___a 841 GATCTTCGTGATATCGAAGAAGCAACAGAAGAAGGAAACGACCGTGCAGA 890
BSNT_04291___ 999 AACGGCTCTTGAAGTATTCGCAAGCAGAATCCACAAATACATCGGTTCTT 1048
|...||||||||..|.||.||||||.|.||.||.||||||||||||||||
BPUM_2579___a 891 AGTAGCTCTTGATATTTTTGCAAGCCGTATTCATAAATACATCGGTTCTT 940
BSNT_04291___ 1049 ACGCTGCAAGAATGAGCGGTGTCGATGCGATCATCTTTACTGCCGGTATC 1098
|.||.||.|||||||..||.||.||||||||||||||.||.||.||.|||
BPUM_2579___a 941 ATGCAGCGAGAATGAATGGCGTAGATGCGATCATCTTCACAGCTGGAATC 990
BSNT_04291___ 1099 GGTGAAAACAGTGTGGAAGTCAGAGAACGCGTTCTGCGCGGTTTAGAATT 1148
||||||||||||...|||||.||||.|||.||.||.||.|||.|||||||
BPUM_2579___a 991 GGTGAAAACAGTTCAGAAGTTAGAGCACGTGTACTTCGTGGTCTAGAATT 1040
BSNT_04291___ 1149 CATGGGCGTATACTGGGATCCTGCGCTTAATAACGTGCGCGGCGAGGAAG 1198
|||||||||.||||||||||||.|.|||||.|||.||.|.|||||.||||
BPUM_2579___a 1041 CATGGGCGTTTACTGGGATCCTTCTCTTAACAACATGAGAGGCGAAGAAG 1090
BSNT_04291___ 1199 CTTTCATCAGCTATCCGCATTCTCCAGTAAAAGTCATGATCATTCCGACT 1248
|.|||||.||||||||.||.|||||.||||||||.||..|.|||||.||.
BPUM_2579___a 1091 CATTCATTAGCTATCCTCACTCTCCTGTAAAAGTGATCGTTATTCCAACG 1140
BSNT_04291___ 1249 GATGAAGAAGTCATGATTGCGCGCGACGTTGTTCGTTTAGCAAAATAA 1296
.|.|||||||||||||||||..|.||.|||.|.||.||||||.||
BPUM_2579___a 1141 AACGAAGAAGTCATGATTGCAAGAGATGTTATGCGCTTAGCATAA--- 1185
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