Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04250 and BPUM_2553

See DNA alignment / Visit BSNT_04250 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:47
# Commandline: needle
#    -asequence pep-align/BSNT_04250___phoP.1.24716.seq
#    -bsequence pep-align/BPUM_2553___phoP.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04250___phoP-BPUM_2553___phoP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04250___phoP-BPUM_2553___phoP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04250___phoP
# 2: BPUM_2553___phoP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 242
# Identity:     200/242 (82.6%)
# Similarity:   221/242 (91.3%)
# Gaps:           2/242 ( 0.8%)
# Score: 1027.5
# 
#
#=======================================

BSNT_04250___      1 MNKKILVVDDEESIVTLLQYNLERSGYDVITASDGEEALKKAETEKPDLI     50
                     ||||||||||||||||||.|||||:||||:||.||||||:||.:|:||||
BPUM_2553___p      1 MNKKILVVDDEESIVTLLSYNLERAGYDVVTARDGEEALEKAASEQPDLI     50

BSNT_04250___     51 VLDVMLPKLDGIEVCKQLRQQKLMFPILMLTAKDEEFDKVLGLELGADDY    100
                     |||:||||:||||||||||.||:|||||||||||:|||||||||||||||
BPUM_2553___p     51 VLDLMLPKMDGIEVCKQLRIQKMMFPILMLTAKDDEFDKVLGLELGADDY    100

BSNT_04250___    101 MTKPFSPREVNARVKAILRRSEIA--APSSEMKNDEMEGQIVIGDLKILP    148
                     ||||||||||.|||||||||::.:  ||:.|.|.:.:..||.||:|:|||
BPUM_2553___p    101 MTKPFSPREVGARVKAILRRAQQSQPAPTQEEKEEIIADQIKIGELRILP    150

BSNT_04250___    149 DHYEAYFKESQLELTPKEFELLLYLGRHKGRVLTRDLLLSAVWNYDFAGD    198
                     :|||.||:|.:||||||||||||||.:|||||||||||||||||||||||
BPUM_2553___p    151 EHYEVYFQEERLELTPKEFELLLYLAKHKGRVLTRDLLLSAVWNYDFAGD    200

BSNT_04250___    199 TRIVDVHISHLRDKIENNTKKPIYIKTIRGLGYKLEEPKMNE    240
                     ||||||||||||||||.|||||.||||||||||||||||.||
BPUM_2553___p    201 TRIVDVHISHLRDKIEKNTKKPTYIKTIRGLGYKLEEPKPNE    242


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