Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04247 and BPUM_2551

See DNA alignment / Visit BSNT_04247 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:46
# Commandline: needle
#    -asequence pep-align/BSNT_04247___polA.1.24716.seq
#    -bsequence pep-align/BPUM_2551___polA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04247___polA-BPUM_2551___polA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04247___polA-BPUM_2551___polA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04247___polA
# 2: BPUM_2551___polA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 880
# Identity:     695/880 (79.0%)
# Similarity:   794/880 (90.2%)
# Gaps:           1/880 ( 0.1%)
# Score: 3621.0
# 
#
#=======================================

BSNT_04247___      1 MTERKKLVLVDGNSLAYRAFFALPLLSNDKGVHTNAVYGFAMILMKMLED     50
                     ||::||||||||||||||||||||||||||||||||:|||||||||||||
BPUM_2551___p      1 MTDKKKLVLVDGNSLAYRAFFALPLLSNDKGVHTNAIYGFAMILMKMLED     50

BSNT_04247___     51 EKPTHMLVAFDAGKTTFRHGTFKEYKGGRQKTPPELSEQMPFIRELLDAY    100
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BPUM_2551___p     51 EKPTHMLVAFDAGKTTFRHETFKEYKGGRQKTPPELSEQMPFIRELLDAY    100

BSNT_04247___    101 QISRYELEQYEADDIIGTLAKSAEKDGFEVKVFSGDKDLTQLATDKTTVA    150
                     |:.||||.||||||||||||..|||||||||:||||||||||:||.||||
BPUM_2551___p    101 QVKRYELPQYEADDIIGTLAVEAEKDGFEVKIFSGDKDLTQLSTDHTTVA    150

BSNT_04247___    151 ITRKGITDVEFYTPEHVKEKYGLTPEQIIDMKGLMGDSSDNIPGVPGVGE    200
                     ||:||||:||:|||.|::|||||.|:||||||||||||||||||||||||
BPUM_2551___p    151 ITKKGITEVEYYTPAHIEEKYGLRPDQIIDMKGLMGDSSDNIPGVPGVGE    200

BSNT_04247___    201 KTAIKLLKQFDSVEKLLESIDEVSGKKLKEKLEEFKDQALMSKELATIMT    250
                     ||||||||||::||.|||.|||||||||||||||||:||:||||||||:.
BPUM_2551___p    201 KTAIKLLKQFETVENLLEHIDEVSGKKLKEKLEEFKEQAVMSKELATILV    250

BSNT_04247___    251 DAPIEVSVSALEYQGFNREQVIAIFKDLGFNTLLERLGEDSAEAEQDQSL    300
                     :|||:||...|.|:|.:.:|||:::|:|||.|||||||| :.|.::...:
BPUM_2551___p    251 EAPIDVSSKDLAYEGPHMDQVISLYKELGFQTLLERLGE-APETDEQVEV    299

BSNT_04247___    301 EDINVKTVTDVTSDILVSPSAFVVEQIGDNYHEEPILGFSIVNETGAYFI    350
                     :.:.||.:|.|||::|...:|.||||:||||||..::||:|.||.||:|:
BPUM_2551___p    300 DALEVKKMTAVTSEMLTDHAALVVEQLGDNYHEADLIGFAIHNENGAFFM    349

BSNT_04247___    351 PKDTAVESEVFKEWVENDDQKKWVFDSKRAVVALRWQGIELKGAEFDTLL    400
                     .|:.|::||.|||||:::.:||||||||||||||||..::|||.:.|.||
BPUM_2551___p    350 TKEDALQSEAFKEWVQDETKKKWVFDSKRAVVALRWHDVDLKGVDNDVLL    399

BSNT_04247___    401 AAYIINPGNSYDDVASVAKDYGLHIVSSDESVYGKGAKRAVPSEDVLSEH    450
                     |:|::||..:|:|||||||:|||:|..|||.|||||||:|:|.||.|.||
BPUM_2551___p    400 ASYVVNPQKTYEDVASVAKEYGLNIALSDEKVYGKGAKQAIPPEDELKEH    449

BSNT_04247___    451 LGRKALAIQSLREKLVQELENNDQLELFEELEMPLALILGEMESTGVKVD    500
                     |||||.||.:|.:..::.||.|||.||:|:||:|||||||||||.|||||
BPUM_2551___p    450 LGRKAAAISALHDLTLEALEKNDQHELYEDLELPLALILGEMESLGVKVD    499

BSNT_04247___    501 VDRLKRMGEELGAKLKEYEEKIHEIAGEPFNINSPKQLGVILFEKIGLPV    550
                     :.||:.|||||..|||||||.||.:|||.||||||||||||||||:|||:
BPUM_2551___p    500 IKRLENMGEELTKKLKEYEETIHRLAGETFNINSPKQLGVILFEKLGLPI    549

BSNT_04247___    551 VKKTKTGYSTSADVLEKLADKHDIVDYILQYRQIGKLQSTYIEGLLKVTR    600
                     :|||||||||||||||||.|||:|:..||.|||||||||||:|||:||||
BPUM_2551___p    550 IKKTKTGYSTSADVLEKLEDKHEIIRSILHYRQIGKLQSTYVEGLMKVTR    599

BSNT_04247___    601 PDSHKVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSEKD    650
                     .|:||||||||||||||||||||||||||||||||||||||||||||::.
BPUM_2551___p    600 KDTHKVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSKEG    649

BSNT_04247___    651 WLIFAADYSQIELRVLAHISKDENLIEAFTNDMDIHTKTAMDVFHVAKDE    700
                     ||:|||||||||||||||||:|||||||||.|||||||||||||||:::|
BPUM_2551___p    650 WLMFAADYSQIELRVLAHISQDENLIEAFTRDMDIHTKTAMDVFHVSEEE    699

BSNT_04247___    701 VTSAMRRQAKAVNFGIVYGISDYGLSQNLGITRKEAGAFIDRYLESFQGV    750
                     ||||||||||||||||||||||||||||||||||||.|||:|||.||:||
BPUM_2551___p    700 VTSAMRRQAKAVNFGIVYGISDYGLSQNLGITRKEAAAFIERYLTSFKGV    749

BSNT_04247___    751 KAYMEDSVQEAKQKGYVTTLMHRRRYIPELTSRNFNIRSFAERTAMNTPI    800
                     |.|||:.|||||||||||||:.||||||::|||||||:||||||||||||
BPUM_2551___p    750 KTYMEEIVQEAKQKGYVTTLLKRRRYIPDITSRNFNIKSFAERTAMNTPI    799

BSNT_04247___    801 QGSAADIIKKAMIDMAAKLKEKQLKARLLLQVHDELIFEAPKEEIEILEK    850
                     ||||||||||||||||.:|||::|:..||||||||||||||||||.||||
BPUM_2551___p    800 QGSAADIIKKAMIDMARRLKEEKLQTNLLLQVHDELIFEAPKEEIAILEK    849

BSNT_04247___    851 LVPEVMEHALALDVPLKVDFASGPSWYDAK    880
                     :||||||:||.|||||||||||||||||||
BPUM_2551___p    850 IVPEVMENALQLDVPLKVDFASGPSWYDAK    879


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_04247 and BPUM_2551

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
