Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04246 and BPUM_2550

See DNA alignment / Visit BSNT_04246 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:46
# Commandline: needle
#    -asequence pep-align/BSNT_04246___mutM.1.24716.seq
#    -bsequence pep-align/BPUM_2550___mutM.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04246___mutM-BPUM_2550___mutM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04246___mutM-BPUM_2550___mutM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04246___mutM
# 2: BPUM_2550___mutM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 278
# Identity:     203/278 (73.0%)
# Similarity:   234/278 (84.2%)
# Gaps:           2/278 ( 0.7%)
# Score: 1082.0
# 
#
#=======================================

BSNT_04246___      1 MDVPELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARKLA     50
                       :|||||||||||||..||:||||::|:|:||||||||.|||||||::.
BPUM_2550___m      1 --MPELPEVETVRRTLKRLVEGKTIETVDIKWPNIIKRPGEPEEFARRMV     48

BSNT_04246___     51 GETIQSIGRRGKFLLFHLDHYVMVSHLRMEGKYGLHQAEEPDDKHVHVIF    100
                     |||||:|.|||||||||||||||||||||||||.:|:|.||.||||||:|
BPUM_2550___m     49 GETIQTIERRGKFLLFHLDHYVMVSHLRMEGKYRVHEAHEPYDKHVHVVF     98

BSNT_04246___    101 TMTDGTQLRYRDVRKFGTMHLFKPGEEAGELPLSQLGPEPDAEEFTSAYL    150
                     |.||||:|||.|||||||||||:||||..||||||||.||..|:||..||
BPUM_2550___m     99 TFTDGTELRYHDVRKFGTMHLFQPGEEEKELPLSQLGYEPFDEQFTPEYL    148

BSNT_04246___    151 KERLAKTNRAVKTALLDQKTVVGLGNIYVDEALFRAGVHPETKANQLSDK    200
                     .|:|.||.|.|||||||||.|||||||||||.||::|:||||||||||.:
BPUM_2550___m    149 WEQLKKTTRVVKTALLDQKIVVGLGNIYVDEVLFKSGIHPETKANQLSLE    198

BSNT_04246___    201 TIKTLHAGIKNTLQEAIDAGGSTVRSYINSQGEIGMFQLQHFVYGKKDEP    250
                     :.|.||..|.:|||.|:||||||:||||||||:||.||||..||.::.||
BPUM_2550___m    199 SCKVLHKQIIDTLQVAVDAGGSTIRSYINSQGDIGTFQLQLLVYDRRGEP    248

BSNT_04246___    251 CKNCGTMISKIVVGGRGTHFCAKCQTKK    278
                     |:.||::|.|.||||||||||..||.:.
BPUM_2550___m    249 CQTCGSIIEKTVVGGRGTHFCVTCQKRP    276


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