Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04243 and BPUM_2549
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:46
# Commandline: needle
# -asequence pep-align/BSNT_04243.1.24716.seq
# -bsequence pep-align/BPUM_2549___ytaF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04243-BPUM_2549___ytaF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04243-BPUM_2549___ytaF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04243
# 2: BPUM_2549___ytaF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 210
# Identity: 163/210 (77.6%)
# Similarity: 188/210 (89.5%)
# Gaps: 0/210 ( 0.0%)
# Score: 850.0
#
#
#=======================================
BSNT_04243 1 MQMVSILLLALAVSLDSFSVGFTYGLRKMKIPFKAILVIACCSGAVMFIS 50
|..:|:|.||:|||:||||||||||||||:||||||::||||||.|:.||
BPUM_2549___y 1 MISISLLFLAIAVSIDSFSVGFTYGLRKMRIPFKAIVIIACCSGIVLLIS 50
BSNT_04243 51 MLIGSFLTKFFPVYVTEKLGGLILVGIGAWVLYQFFKPAKDKEYLLHEKT 100
|||||.||.|.||.||:||||.||:.||.||||||:||||:::.||||||
BPUM_2549___y 51 MLIGSLLTTFLPVSVTDKLGGGILIAIGLWVLYQFYKPAKERDLLLHEKT 100
BSNT_04243 101 LLNLEVRSLGIVIHILRKPMSADIDKSGVINGIEAVLLGFALSIDAFGAG 150
|||:||:|||:||||||||.|||||:||.||||||||||.||||||||||
BPUM_2549___y 101 LLNVEVQSLGLVIHILRKPTSADIDRSGTINGIEAVLLGIALSIDAFGAG 150
BSNT_04243 151 IGAAILGFSPIVMSIAVAIMSSLFVSIGINAGHFLSKWKWIDKMAFLPGL 200
|||||||||||||||.||:||||||.||:.|||:|:.|:||||:|.||||
BPUM_2549___y 151 IGAAILGFSPIVMSITVAVMSSLFVCIGLRAGHYLANWRWIDKLACLPGL 200
BSNT_04243 201 LLITIGLWKL 210
|||.||:|||
BPUM_2549___y 201 LLILIGVWKL 210
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