Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04243 and BPUM_2549
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:46
# Commandline: needle
# -asequence dna-align/BSNT_04243.1.24716.seq
# -bsequence dna-align/BPUM_2549___ytaF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04243-BPUM_2549___ytaF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04243-BPUM_2549___ytaF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04243
# 2: BPUM_2549___ytaF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 647
# Identity: 448/647 (69.2%)
# Similarity: 448/647 (69.2%)
# Gaps: 28/647 ( 4.3%)
# Score: 1478.5
#
#
#=======================================
BSNT_04243 1 ATGCAAATGGTTTCTATACTGCTGCTG------GCGTTGGCTGTCAGCTT 44
|||.||||.||...|||.||| ||..|.||.||.|||.|
BPUM_2549___y 1 ------ATGATTTCGATTTCGCTCCTGTTTTTAGCTATTGCAGTTAGCAT 44
BSNT_04243 45 GGACAGTTTTTCAGTCGGATTTACGTACGGATTGAGAAAAATGAAAATAC 94
.|||||.|||||.||.||.||||||||.||..|..|.|||||||..||.|
BPUM_2549___y 45 CGACAGCTTTTCTGTAGGCTTTACGTATGGTCTCCGCAAAATGAGGATCC 94
BSNT_04243 95 CGTTTAAAGCGATTTTGGTTATCGCCTGCTGTTCCGGTGCTGTCATGTTT 144
|.||||||||.||..|..||||.||.|||||.||.||...|||..||.|.
BPUM_2549___y 95 CATTTAAAGCCATCGTCATTATTGCATGCTGCTCAGGGATTGTGCTGCTC 144
BSNT_04243 145 ATATCCATGCTGATCGGAAGCTTTCTCACGAAGTTTTTTCCTGTATATGT 194
||.||.||||||||.||.|||.|.||.||||..|||.|.|||||.|..||
BPUM_2549___y 145 ATTTCTATGCTGATTGGCAGCCTGCTGACGACATTTCTCCCTGTTTCAGT 194
BSNT_04243 195 GACGGAGAAGCTTGGCGGTTTGATATTGGTTGGAATCGGTGCGTGGGTTC 244
|||.||.||.||.||.||....||.||..|||..|||||....|||||.|
BPUM_2549___y 195 GACCGATAAACTGGGGGGAGGCATTTTAATTGCCATCGGCCTTTGGGTCC 244
BSNT_04243 245 TGTATCAATTTTTCAAACCGGCAAAAGATAAAGAATACCTATTGCATGAA 294
||||||||||||.||||||.||.|||||....||.|..||..|.||||||
BPUM_2549___y 245 TGTATCAATTTTACAAACCAGCGAAAGAGCGTGATTTGCTTCTTCATGAA 294
BSNT_04243 295 AAAACACTGCTTAATCTAGAGGTTCGGTCATTAGGAATTGTGATTCATAT 344
||.|||.||||||||.|.||.||.|..||..|.||..||||.|||||.||
BPUM_2549___y 295 AAGACATTGCTTAATGTGGAAGTCCAATCGCTTGGGCTTGTCATTCACAT 344
BSNT_04243 345 TTTGAGAAAACCCATGAGTGCGGATATCGACAAATCGGGTGTGATCAACG 394
|||.|||||.||.|..|||||.|||||.|||..|||.||...|||.||.|
BPUM_2549___y 345 TTTAAGAAAGCCGACAAGTGCAGATATTGACCGATCTGGGACGATTAATG 394
BSNT_04243 395 GAATTGAGGCGGT-CTTATTGGGATTTGCCTTATCGATTGATGCCTTTGG 443
|.||.||.||.|| |||.|| |||.||||.|||||.||||||||.|||||
BPUM_2549___y 395 GGATAGAAGCTGTCCTTCTT-GGAATTGCTTTATCCATTGATGCATTTGG 443
BSNT_04243 444 AGCAGGTATAGGCGCAGCCATTCTCGGTTTTTCGCCGATTGTGATGAGCA 493
.|||||.||.||||||||.|||||.||||||||.||.|||||.|||||.|
BPUM_2549___y 444 CGCAGGGATTGGCGCAGCGATTCTAGGTTTTTCTCCAATTGTCATGAGTA 493
BSNT_04243 494 TCGCCGTGGCAATCATGAGCTCGCTGTTTGTATCAATTGGAAT-CAATGC 542
||.|.||.|||.|.|||||.||.||.|||||||..||.||..| |.| ||
BPUM_2549___y 494 TCACGGTCGCAGTGATGAGTTCACTTTTTGTATGTATCGGGCTACGA-GC 542
BSNT_04243 543 CGGCCATTTTCTGTCTAAGTGGAAATGGATCGATAAAATGGCGTTTTTGC 592
|||.||||...||.|.||.|||...||||||||||||.|.||.|.|||.|
BPUM_2549___y 543 CGGTCATTACTTGGCAAATTGGCGCTGGATCGATAAACTCGCATGTTTAC 592
BSNT_04243 593 CGGGGCTTC------TATTAATCACGATTGGGCTCTGGAAATTGTAA 633
|.||||||| |||||||| |||.|.|||||..|||||
BPUM_2549___y 593 CAGGGCTTCTGCTCATATTAATC------GGGGTTTGGAAGCTGTAA 633
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