Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04234 and BPUM_2543
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:45
# Commandline: needle
# -asequence pep-align/BSNT_04234___dnaB.1.24716.seq
# -bsequence pep-align/BPUM_2543___dnaB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04234___dnaB-BPUM_2543___dnaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04234___dnaB-BPUM_2543___dnaB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04234___dnaB
# 2: BPUM_2543___dnaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 475
# Identity: 273/475 (57.5%)
# Similarity: 357/475 (75.2%)
# Gaps: 4/475 ( 0.8%)
# Score: 1412.0
#
#
#=======================================
BSNT_04234___ 1 MADYWKDVLPVDPYVVKSRSMLQDIDRQIITQLYQPLIGPVAFSLYMTLW 50
|.::||:||.||||||||.|:|.|||||:||.|||||||..|||||||||
BPUM_2543___d 1 MTEHWKEVLAVDPYVVKSASLLGDIDRQLITLLYQPLIGMSAFSLYMTLW 50
BSNT_04234___ 51 GELEQNRLWGGESTHRQLMGMTQSNLKTIHQEQGKLEGIGLLKVYMKESE 100
|||||||:||..:.|||||.|.|:||..|.:|:.|||.||||:.|.:|:|
BPUM_2543___d 51 GELEQNRMWGKPAPHRQLMVMLQTNLNDIFEERLKLEAIGLLRTYEQETE 100
BSNT_04234___ 101 RQERLFIYELLPPLRPNEFFEDGMLNVFLYNRVGKTKYQQLKQFFTHPAI 150
:.|||.|||:|||||:|||:||||||.||:||.|.||.||:.:|::|.:
BPUM_2543___d 101 -EGRLFTYELVPPLRPDEFFQDGMLNVLLYHRVEKAKYMQLRDYFSYPGV 149
BSNT_04234___ 151 SEDAKDITRPFNHAFESLQPSEWKLTSDMEETVRLAEGTEYTSVGQSPSY 200
..:||:|:|.|...|..|||.|.::|.::.:...|.:|.||.:||.|...
BPUM_2543___d 150 PAEAKNISRSFEEVFHVLQPGERRMTEEINQASSLDQGYEYVTVGSSQPA 199
BSNT_04234___ 201 TITEDVFDFDLFLAGLSETMIPRKAMTQQVRDTIKKLSYLYGIDPLQMQN 250
.:::|.|||||.|||:|:.||||||:|:||::|||||:.:|||.||||||
BPUM_2543___d 200 PLSDDSFDFDLLLAGMSDMMIPRKALTKQVKETIKKLAVVYGITPLQMQN 249
BSNT_04234___ 251 VVMSAIDERDVITTEALRKAASDWYQIERNGQLPDLVEKTQPVHLR-EGE 299
:|..|.....:|:||.|||||.||||||..|:.|.|:::.||.||| :..
BPUM_2543___d 250 IVAGACGSDQMISTEELRKAARDWYQIEYRGEQPKLIDQKQPRHLRQDAS 299
BSNT_04234___ 300 KPAEDDSLDGKLIALLEAISPKKLLQDIADGTEPSKADLKIIEEIMFEQK 349
|....|:.|.|||..|:.|||::||:|:|||.||:.|||:|:|:||.||:
BPUM_2543___d 300 KSPLADTPDAKLIEKLDHISPRELLKDMADGIEPTYADLRIVEDIMLEQQ 349
BSNT_04234___ 350 LEPGVTNVLIYYVMLKTDMKLSKNYIQKIASHWARKKVKTVREAMKLAIE 399
|||||.||||||.:|||||||||.|:||||:||.|||:|||..|||:|.|
BPUM_2543___d 350 LEPGVMNVLIYYTLLKTDMKLSKTYMQKIAAHWVRKKIKTVAAAMKIAKE 399
BSNT_04234___ 400 ENRQYLEWA-EGKTKSSKRNQKVIREEKLPDWMTEKETASDSESGQ-QKL 447
||||..||| :.|.:|:..:.||:|||||||||.|.||.......| ..|
BPUM_2543___d 400 ENRQMTEWAQQKKQRSTYGSGKVVREEKLPDWMKETETKEQPAKEQTDSL 449
BSNT_04234___ 448 HPQDLEEQKKKMMEEMQKLKKYSAY 472
..:|||.:|:|::::.:.:|||:|:
BPUM_2543___d 450 STEDLEREKEKLLDQFKNMKKYNAH 474
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