Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04229 and BPUM_2541
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:45
# Commandline: needle
# -asequence pep-align/BSNT_04229___ytxB.1.24716.seq
# -bsequence pep-align/BPUM_2541___ytxB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04229___ytxB-BPUM_2541___ytxB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04229___ytxB-BPUM_2541___ytxB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04229___ytxB
# 2: BPUM_2541___ytxB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 219
# Identity: 98/219 (44.7%)
# Similarity: 144/219 (65.8%)
# Gaps: 13/219 ( 5.9%)
# Score: 500.0
#
#
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BSNT_04229___ 1 MKRKTAVKWLAVLAGAG---LLYWGNKTYLNVSPKEIRVWVLSFGVFAPL 47
|.:: |||..|..|| ||:|.||.:|.::||:::.|||.||:.||.
BPUM_2541___y 1 MNKR---KWLLFLVIAGLAVLLWWLNKQHLQLAPKDVKNWVLQFGLLAPF 47
BSNT_04229___ 48 MFIGISIVRPLVLFPVSVISIAGGLAFGPLLGTLYTLFGSMCASAVSFFA 97
:|:.:|:.||.||.|::|.|:|.|||||.:|||:|.|.|:...:..||..
BPUM_2541___y 48 VFLFLSLFRPFVLVPLTVFSLAAGLAFGSVLGTIYALVGATAGALGSFLL 97
BSNT_04229___ 98 AGLFSAKK---NGHYERLEAIQKQMEDNGFFYIFLLRILPINFDFVSYAA 144
|..|.:|| .....:|.|:..:::::||.||.||||.||:||||||||
BPUM_2541___y 98 ATTFRSKKKETESSSRKLRAVTSRIQEHGFLYILLLRIAPIHFDFVSYAA 147
BSNT_04229___ 145 GLSNVKALPYFAATAVGIIPGTIALNVLGASFLAGNLPAFFMVLALYIVF 194
..|......:.|||.:|:||||:||||||:||::||..|..:|..:|::|
BPUM_2541___y 148 AASRANYRAFTAATFLGLIPGTVALNVLGSSFVSGNYAALAIVCLIYLIF 197
BSNT_04229___ 195 ISLPFIFRKKMQNLFQESN 213
||:|.:.::|..:||
BPUM_2541___y 198 ISVPLVLKRKRPDLF---- 212
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