Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04208 and BPUM_2528

See DNA alignment / Visit BSNT_04208 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:44
# Commandline: needle
#    -asequence pep-align/BSNT_04208___ysdB.1.24716.seq
#    -bsequence pep-align/BPUM_2528___ysdB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04208___ysdB-BPUM_2528___ysdB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04208___ysdB-BPUM_2528___ysdB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04208___ysdB
# 2: BPUM_2528___ysdB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 134
# Identity:      80/134 (59.7%)
# Similarity:   101/134 (75.4%)
# Gaps:           4/134 ( 3.0%)
# Score: 461.0
# 
#
#=======================================

BSNT_04208___      1 MFVMVLRIILLALFAYCIYAVVKYVANPKRRLKLAQSKEHFYIIDEQNNT     50
                     |||:::|:.|:||..|..|..||:.:||:|:||.||.||.||.:|||.|.
BPUM_2528___y      1 MFVILIRLALVALLVYIFYMAVKFFSNPRRKLKQAQLKEGFYFMDEQQNA     50

BSNT_04208___     51 RKNFQLTYKGVLFEGEKHIPSKDHPLFIHTIFVWTESPEKLKHFSAKDFE    100
                     ||||...|||||||||||:||||||||:|:|:|||||||||..|:.:|||
BPUM_2528___y     51 RKNFNFVYKGVLFEGEKHVPSKDHPLFVHSIYVWTESPEKLSEFTLEDFE    100

BSNT_04208___    101 NIEEKVLERYPNCKIDWDQPIKLAKKAEER----    130
                     .:||.::||||..|||||||||..|:.:..    
BPUM_2528___y    101 KLEENIIERYPQTKIDWDQPIKKIKQKKGADTPS    134


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