Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04206 and BPUM_2527
See
DNA alignment /
Visit
BSNT_04206 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:43
# Commandline: needle
# -asequence pep-align/BSNT_04206___ysdC.1.24716.seq
# -bsequence pep-align/BPUM_2527___ysdC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04206___ysdC-BPUM_2527___ysdC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04206___ysdC-BPUM_2527___ysdC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04206___ysdC
# 2: BPUM_2527___ysdC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 362
# Identity: 286/362 (79.0%)
# Similarity: 331/362 (91.4%)
# Gaps: 1/362 ( 0.3%)
# Score: 1544.0
#
#
#=======================================
BSNT_04206___ 1 MAKLDETLTMLKDLTDAKGIPGNEREVRQVMKSYIEPFADEVTTDRLGSL 50
|.|||:|||||||||||||||||||:|::||::||..:||||::||||||
BPUM_2527___y 1 MTKLDQTLTMLKDLTDAKGIPGNERDVKKVMQTYIGSYADEVSSDRLGSL 50
BSNT_04206___ 51 IAKKTGAENGPKIMIAGHLDEVGFMVTQITDKGFIRFQTVGGWWAQVMLA 100
||||.|..||||||:||||||||||||:|.|||:||||||||||:|||||
BPUM_2527___y 51 IAKKEGNANGPKIMLAGHLDEVGFMVTKIDDKGYIRFQTVGGWWSQVMLA 100
BSNT_04206___ 101 QRVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDMFIDIGASSREEA 150
||||||||||:|||||||||||:|||||||||:|||||||||||||:|:|
BPUM_2527___y 101 QRVTIVTKKGDITGVIGSKPPHVLSPEARKKSIEIKDMFIDIGASSKEQA 150
BSNT_04206___ 151 LEWGILPGDMIVPHFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNT 200
:|||:||||.|||:|||||||:||.|||||||||||||:||||::||.||
BPUM_2527___y 151 MEWGVLPGDQIVPYFEFTVMNDEKMLLAKAWDNRIGCAVAIDVMKNLHNT 200
BSNT_04206___ 201 DHPNIVYGVGTVQEEVGLRGAKTAAHTIQPDIAFGVDVGIAGDTPGISEK 250
.|.||.|.|.|||||||||||||||.||||||.|.:|||:|||||||:||
BPUM_2527___y 201 QHENIAYSVATVQEEVGLRGAKTAASTIQPDIGFAIDVGVAGDTPGITEK 250
BSNT_04206___ 251 EAQSKMGKGPQIIVYDASMVSHKGLRDAVVATAEEAGIPYQFDAIAGGGT 300
||.||:||||.|:|:||||||||||||.||.||:|..||||:|::.||||
BPUM_2527___y 251 EATSKLGKGPTIVVFDASMVSHKGLRDFVVQTADELNIPYQYDSMPGGGT 300
BSNT_04206___ 301 DSGAIHLTANGVPALSITIATRYIHTHAAMLHRDDYENAVKLITEVIKKL 350
|:|.||||.:|||:|||.|.:|||||||||:|||||||||||:|||||:|
BPUM_2527___y 301 DAGGIHLTGHGVPSLSIGIPSRYIHTHAAMIHRDDYENAVKLLTEVIKRL 350
BSNT_04206___ 351 DRKTVDEITYQ- 361
|:|||::|||.
BPUM_2527___y 351 DQKTVEQITYGS 362
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.