Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04181 and BPUM_2523

See DNA alignment / Visit BSNT_04181 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:42
# Commandline: needle
#    -asequence pep-align/BSNT_04181___ysgA.1.24716.seq
#    -bsequence pep-align/BPUM_2523___ysgA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04181___ysgA-BPUM_2523___ysgA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04181___ysgA-BPUM_2523___ysgA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04181___ysgA
# 2: BPUM_2523___ysgA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 250
# Identity:     161/250 (64.4%)
# Similarity:   197/250 (78.8%)
# Gaps:           5/250 ( 2.0%)
# Score: 819.0
# 
#
#=======================================

BSNT_04181___      1 MKQIESAKNQKVKDWKKLHTKKERTKTNTFLIEGEHLVEEALKSPGIVKE     50
                     ||.||||||..:|.|||||||||||||..||:||.|||||||||.. |||
BPUM_2523___y      1 MKYIESAKNTHIKQWKKLHTKKERTKTGLFLVEGIHLVEEALKSRA-VKE     49

BSNT_04181___     51 ILVKDETRIPSDLETGIQCYMLSEDAFSAVTETETPQQIAAVCHMP--EE     98
                     ::|....::||.::..|:.|.|||:||.|:|||||||.|||||.:|  ||
BPUM_2523___y     50 LMVTSPDKLPSHIDPDIELYELSEEAFFAMTETETPQHIAAVCTVPVFEE     99

BSNT_04181___     99 KLATARKVLLIDAVQDPGNLGTMIRTADAAGLDAVVLGDGTADAFNGKTL    148
                     |  ...::||:|||||||||||:||||||||||||:|||||.||:|||||
BPUM_2523___y    100 K--KYERLLLLDAVQDPGNLGTLIRTADAAGLDAVILGDGTVDAYNGKTL    147

BSNT_04181___    149 RSAQGSHFHIPVVRRNLPSYVDELKAEGVKVYGTALQNGAPYQEIPQSES    198
                     |||||||||:|:::::|...:...|.:|:.|||:||.|...|:.:.....
BPUM_2523___y    148 RSAQGSHFHLPILKQSLQQTIAACKEQGIPVYGSALNNAKAYKSVTAEGP    197

BSNT_04181___    199 FALIVGNEGAGVDAALLEKTDLNLYVPLYGQAESLNVAVAAAILVYHLRG    248
                     |||||||||.|::..:|:.||.|||||:||||||||||||||:|||||||
BPUM_2523___y    198 FALIVGNEGGGINPEILQMTDHNLYVPMYGQAESLNVAVAAAVLVYHLRG    247


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