Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04175 and BPUM_2520

See DNA alignment / Visit BSNT_04175 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:42
# Commandline: needle
#    -asequence pep-align/BSNT_04175___rnhC.1.24716.seq
#    -bsequence pep-align/BPUM_2520___rnhC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04175___rnhC-BPUM_2520___rnhC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04175___rnhC-BPUM_2520___rnhC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04175___rnhC
# 2: BPUM_2520___rnhC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 312
# Identity:     213/312 (68.3%)
# Similarity:   251/312 (80.4%)
# Gaps:           5/312 ( 1.6%)
# Score: 1084.0
# 
#
#=======================================

BSNT_04175___      1 MSHSVIKVSLSAIDQMKMTYSGSLTASVPQGAVFQAKPPGCTITAYKSGK     50
                     |..||:|.:...:.:||..|:..||.::|.||:||||.||||||||:|||
BPUM_2520___r      1 MPQSVLKATSEDLKKMKSAYAHHLTDTLPPGALFQAKVPGCTITAYRSGK     50

BSNT_04175___     51 VLFQGKNAAAESARWGTAEPEKKKMAKKPADPRYAPPADIAGMSVIGSDE    100
                     |||||:.|.||::::...:....|.:|.||..:|:||:.||.||||||||
BPUM_2520___r     51 VLFQGQKAEAEASQFSHLKATDPKSSKTPAVTKYSPPSGIASMSVIGSDE    100

BSNT_04175___    101 VGTGDYFGPMTVVCAYVDKTMLPLMKELGVKDSKDLKDPQIIEIARNLIK    150
                     |||||||||:||..||||.:.|.|||||||||||.|||||||.||::|||
BPUM_2520___r    101 VGTGDYFGPITVCAAYVDASHLALMKELGVKDSKGLKDPQIINIAKDLIK    150

BSNT_04175___    151 TIPYSLLVLKNEKYNSMQEKGMSQGKMKALLHNQAITHLLRKLDGVKPEA    200
                     |||:|||||:|||||:||||||||||||||||||.||..|.||||.:|||
BPUM_2520___r    151 TIPFSLLVLRNEKYNAMQEKGMSQGKMKALLHNQVITSALEKLDGKQPEA    200

BSNT_04175___    201 ILIDQFAEPGVYFNHLKGRDIVKERTYFSTKAEGIHLAVAAASIIARYSF    250
                     ||||||||||:||.||.|:.|::||||||||||||||:||||||||||:|
BPUM_2520___r    201 ILIDQFAEPGIYFKHLAGKKIIRERTYFSTKAEGIHLSVAAASIIARYAF    250

BSNT_04175___    251 LMEMDKLSREAGMTLPKGAGPHVDEAAAKLILKKGASALRTFTKLHFANT    300
                     |:||||||..||..:|||||||||:||||||...|..|||.|||||||||
BPUM_2520___r    251 LIEMDKLSEAAGFEIPKGAGPHVDKAAAKLIKLHGEEALRQFTKLHFANT    300

BSNT_04175___    301 QKAQRLADKKRS    312
                     |||::..     
BPUM_2520___r    301 QKAKKWL-----    307


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