Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04173 and BPUM_2518
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:42
# Commandline: needle
# -asequence pep-align/BSNT_04173___yshB.1.24716.seq
# -bsequence pep-align/BPUM_2518___yshB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04173___yshB-BPUM_2518___yshB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04173___yshB-BPUM_2518___yshB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04173___yshB
# 2: BPUM_2518___yshB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 177
# Identity: 120/177 (67.8%)
# Similarity: 151/177 (85.3%)
# Gaps: 0/177 ( 0.0%)
# Score: 642.0
#
#
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BSNT_04173___ 1 MLDIIILILLLMGTLLGLKRGFILQFIRLTSFILSIAFAALFYKNVAPHL 50
|:|||||.|||||||:|||||||||||:|.||::||..|::||:::||.|
BPUM_2518___y 1 MIDIIILFLLLMGTLVGLKRGFILQFIKLISFVVSILVASMFYQSLAPQL 50
BSNT_04173___ 51 HWIPAPDFSAGQPALSFFTGNLEAAYYNAIAFIVLFIIAKILLRIIGSFL 100
.|||||:||.||..|:||:||||.||||.||||:|||:.||||.|||..|
BPUM_2518___y 51 TWIPAPNFSGGQAQLAFFSGNLETAYYNTIAFIILFILTKILLAIIGGLL 100
BSNT_04173___ 101 SIVAGIPVIKQINQLLGAVLGFLEVYLFTFVLLYVASVLPVDALQQMMGQ 150
:.:|.||||||:|:|||.||||||.|||.|:||:||::|||||||.|:.:
BPUM_2518___y 101 TTIASIPVIKQVNKLLGGVLGFLETYLFVFILLFVAALLPVDALQTMLSK 150
BSNT_04173___ 151 SSLANVIINHTPYLSGLLQELWTQYGA 177
|.||:.|::||||||||:::|||.||.
BPUM_2518___y 151 SILADAIVSHTPYLSGLVKDLWTTYGV 177
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