Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04172 and BPUM_2517

See DNA alignment / Visit BSNT_04172 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:41
# Commandline: needle
#    -asequence pep-align/BSNT_04172___yshC.1.24716.seq
#    -bsequence pep-align/BPUM_2517___yshC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04172___yshC-BPUM_2517___yshC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04172___yshC-BPUM_2517___yshC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04172___yshC
# 2: BPUM_2517___yshC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 570
# Identity:     432/570 (75.8%)
# Similarity:   503/570 (88.2%)
# Gaps:           0/570 ( 0.0%)
# Score: 2262.0
# 
#
#=======================================

BSNT_04172___      1 MHKKDIIRLLETIAVYMELKGDNPFKVSAFRKAAAALEQDDRSLSEMDDM     50
                     |:|||||:||||||||||||||||||:||||||||||||||||||::||:
BPUM_2517___y      1 MNKKDIIKLLETIAVYMELKGDNPFKISAFRKAAAALEQDDRSLSQIDDL     50

BSNT_04172___     51 MSLSGIGKGTYSVIKEYIDEGKSSTLESLQKEVPEGLVPLLKLPGLGGKK    100
                     ::|.||||||::||.|||::|:|.|||.|:||||||||||||||||||||
BPUM_2517___y     51 LALPGIGKGTFAVITEYIEKGQSETLEQLKKEVPEGLVPLLKLPGLGGKK    100

BSNT_04172___    101 IAKLYKELGVHDAESLKEACEQQKVQGLAGFGKKSEEKILQALGEAGKQP    150
                     |||||:|||||||:|||||||.:|||.|||||||:|||||.||.||||||
BPUM_2517___y    101 IAKLYQELGVHDAQSLKEACEAEKVQALAGFGKKTEEKILAALEEAGKQP    150

BSNT_04172___    151 ERFPIGYALRIAREIEEHLSQFTHIIKFSRAGSLRRARETVKDLDYIIAT    200
                     ||.|||:||.:|..|:..|.:...||:|||||||||||||||||||||||
BPUM_2517___y    151 ERLPIGFALDVAERIDHALEEMKGIIRFSRAGSLRRARETVKDLDYIIAT    200

BSNT_04172___    201 DHPAEVREQLLELPNIKSVIASGDTKVSVILSFEYETSVDFRLVTEEQFP    250
                     |:..:|||||:.|.::|.|||||||||||:|:.::|.||||||||.:||.
BPUM_2517___y    201 DNHEQVREQLVALDDVKDVIASGDTKVSVVLALDFEISVDFRLVTSDQFA    250

BSNT_04172___    251 TTLHHFTGSKDHNIKMRQIAKERGERISEYGVETVETGEIKTFPSEREFY    300
                     ||||||||||||||:|||:|||||||||||||||:||||:|||..|..||
BPUM_2517___y    251 TTLHHFTGSKDHNIRMRQLAKERGERISEYGVETIETGEVKTFKDESAFY    300

BSNT_04172___    301 AHFGLPLIPPEIRESGQEVETYSDSIELIEPGQIKGDLHMHSTWSDGAFS    350
                     |||.||||||||||:|.|::||.:|::.:|...|||||||||||||||||
BPUM_2517___y    301 AHFQLPLIPPEIRETGAEIDTYKESMQFVELRDIKGDLHMHSTWSDGAFS    350

BSNT_04172___    351 IREMAEACIKKGYQYMAITDHSQYLKVANGLTAERLKQQAKEIDALNAEF    400
                     |||||||||.|||:||||||||||||||||||.|||:.||||||.||.||
BPUM_2517___y    351 IREMAEACIAKGYEYMAITDHSQYLKVANGLTKERLRLQAKEIDKLNQEF    400

BSNT_04172___    401 ENFRILKGVEMDILPDGTLDYDDDMLAEMDIVIASIHSSFNQPEHVIMKR    450
                     |:|.|.|||||||||||:||||||.|.:||.|||||||||:|||.|||:|
BPUM_2517___y    401 EHFHIFKGVEMDILPDGSLDYDDDFLKDMDFVIASIHSSFSQPEEVIMER    450

BSNT_04172___    451 LETALTNKHVDIIAHPTGRLIGRRAGYEIDIDQLIELARKTNTALELNAN    500
                     ||.||.|:|||:||||||||||||.||.::||||||||:||.||||||:|
BPUM_2517___y    451 LENALRNQHVDLIAHPTGRLIGRRDGYALNIDQLIELAKKTGTALELNSN    500

BSNT_04172___    501 PARLDLRTEHLMKANEQGVTLVINTDAHNIEMLDDMKTGVTAARKGWTET    550
                     |:||||:||||:||||.||.::||||||||.||:.|:.||||||||||:.
BPUM_2517___y    501 PSRLDLKTEHLIKANEAGVNIMINTDAHNIAMLEHMEVGVTAARKGWTQK    550

BSNT_04172___    551 KNVLNARSLKDVEVFLKRND    570
                     .||:|..:|.:::.||.|:.
BPUM_2517___y    551 GNVVNTFTLNEIKKFLTRDR    570


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_04172 and BPUM_2517

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
