Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04171 and BPUM_2516

See DNA alignment / Visit BSNT_04171 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:41
# Commandline: needle
#    -asequence pep-align/BSNT_04171___mutSB.1.24716.seq
#    -bsequence pep-align/BPUM_2516___mutS2.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04171___mutSB-BPUM_2516___mutS2.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04171___mutSB-BPUM_2516___mutS2.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04171___mutSB
# 2: BPUM_2516___mutS2
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 786
# Identity:     605/786 (77.0%)
# Similarity:   691/786 (87.9%)
# Gaps:           1/786 ( 0.1%)
# Score: 3082.0
# 
#
#=======================================

BSNT_04171___      1 -MQQKVLSALEFHKVKEQVIGHAASSLGKEMLLELKPSASIDEIKKQLDE     49
                      :||||||:||||||||:|:.:.||:||||...:|.|...|:.|:..|:|
BPUM_2516___m      1 MLQQKVLSSLEFHKVKEKVMSYTASTLGKERAQDLTPLTDIETIQHLLEE     50

BSNT_04171___     50 VDEASDIIRLRGQAPFGGLVDIRGALRRAEIGSVLSPSEFTEISGLLYAV     99
                     |.||.|:|||:|.||||||.|||.|::||||||.|||||..||:||||||
BPUM_2516___m     51 VAEAQDVIRLKGSAPFGGLTDIRRAVKRAEIGSTLSPSELMEIAGLLYAV    100

BSNT_04171___    100 KQMKHFITQMAEDGVDIPLIHQHAEQLITLSDLERDINSCIDDHGEVLDH    149
                     |.||||:|.|.|||||||.:|.:||.||.|.|:.::|.|||.|:||||||
BPUM_2516___m    101 KNMKHFLTSMYEDGVDIPRLHTYAETLILLPDIRKEIESCIGDNGEVLDH    150

BSNT_04171___    150 ASETLRGIRTQLRTLESRVRDRLESMLRSSSASKMLSDTIVTIRNDRFVI    199
                     |:..||.||||||:|||:|||:||:|:||.||||||||||||||||||||
BPUM_2516___m    151 ATPALRTIRTQLRSLESKVRDKLEAMIRSQSASKMLSDTIVTIRNDRFVI    200

BSNT_04171___    200 PVKQEYRSSYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIE    249
                     ||||||||:|||||||.||||||||||||.:||:||:|||.::|||||:|
BPUM_2516___m    201 PVKQEYRSNYGGIVHDQSSSGATLFIEPQVVVDVNNTLQQTRLKEKQEVE    250

BSNT_04171___    250 RILRVLTEKTAEYTEELFLDLQVLQTLDFIFAKARYAKAVKATKPIMNDT    299
                     :||::|||..:|:..||..:::.|||||||||||:|||..|||||.:||.
BPUM_2516___m    251 KILQMLTESVSEHIGELLHNVKELQTLDFIFAKAKYAKTEKATKPAVNDQ    300

BSNT_04171___    300 GFIRLKKARHPLLPPDQVVANDIELGRDFSTIVITGPNTGGKTVTLKTLG    349
                     |.|.||:|||||||.|||||||||||:|||||||||||||||||||||||
BPUM_2516___m    301 GEIYLKRARHPLLPRDQVVANDIELGKDFSTIVITGPNTGGKTVTLKTLG    350

BSNT_04171___    350 LLTLMAQSGLHIPADEGSEAAVFEHVFADIGDEQSIEQSLSTFSSHMVNI    399
                     |||||.|:|||||.:||||.|||:.|||||||||||||||||||||||||
BPUM_2516___m    351 LLTLMTQAGLHIPVEEGSEVAVFDQVFADIGDEQSIEQSLSTFSSHMVNI    400

BSNT_04171___    400 VGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDDVHRTNARVLATTH    449
                     |.||:.:..|||||||||||||||.|||||||||||:||:|||||:||||
BPUM_2516___m    401 VDILKNLTSNSLVLFDELGAGTDPAEGAALAMSILDEVHQTNARVIATTH    450

BSNT_04171___    450 YPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLG    499
                     ||||||||||||||.|||||||||||||||:|||||||||||||||||||
BPUM_2516___m    451 YPELKAYGYNREGVTNASVEFDIETLSPTYRLLIGVPGRSNAFEISKRLG    500

BSNT_04171___    500 LPDHIIGQAKSEMTAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEK    549
                     ||||:|.:||::|.|||||||.||||||.|||:|||||.|||..||||||
BPUM_2516___m    501 LPDHLIDRAKADMHAEHNEVDQMIASLEDSKKQAEEELHETEVYRKEAEK    550

BSNT_04171___    550 LHKELQQQIIELNSKKDKMLEEAEQQAAEKVKAAMKEAEDIIHELRTIKE    599
                     ||||||:||:|.|.:|||:|||||.:|.||::.|.||||:||.|||:||.
BPUM_2516___m    551 LHKELQRQILEWNEQKDKLLEEAELKAKEKIEQASKEAEEIIQELRSIKS    600

BSNT_04171___    600 EHKSFKDHELINAKKRLEGAMPAFEKSKKPEKPKAQKRDFKPGDEVKVLT    649
                     ||:|||:||||:|:||||.|:|.|::.||||..|...|..|.||||||||
BPUM_2516___m    601 EHRSFKEHELIDARKRLEEAVPEFDRKKKPEPAKKAVRQLKSGDEVKVLT    650

BSNT_04171___    650 FGQKGTLLEKTGGNEWNVQIGILKMKVKEKDLEFIKSAPEQKKEKIITAV    699
                     |||||||||:||..||:||:|||||||||||:||||||||.|:||.||||
BPUM_2516___m    651 FGQKGTLLEQTGDKEWSVQMGILKMKVKEKDMEFIKSAPEFKQEKAITAV    700

BSNT_04171___    700 KGKDYHVSLELDLRGERYENALSRVEKYLDDAVLAGYPRVSIIHGKGTGA    749
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_2516___m    701 KGKDYHVSLELDLRGERYENALSRVEKYLDDAVLAGYPRVSIIHGKGTGA    750

BSNT_04171___    750 LRKGVQDLLKNHRSVKSSRFGEAGEGGSGVTVVELK    785
                     ||||||:|||.|||||::||||.||||||||:||||
BPUM_2516___m    751 LRKGVQELLKQHRSVKNARFGEQGEGGSGVTIVELK    786


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_04171 and BPUM_2516

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
