Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04162 and BPUM_2509
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:40
# Commandline: needle
# -asequence pep-align/BSNT_04162___etfA.1.24716.seq
# -bsequence pep-align/BPUM_2509___etfA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04162___etfA-BPUM_2509___etfA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04162___etfA-BPUM_2509___etfA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04162___etfA
# 2: BPUM_2509___etfA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 325
# Identity: 243/325 (74.8%)
# Similarity: 289/325 (88.9%)
# Gaps: 0/325 ( 0.0%)
# Score: 1278.0
#
#
#=======================================
BSNT_04162___ 1 MGKKVIVLGEIRDGELRNVTFEAIAAGRTISGDGEVIGVLIGENVQSIAQ 50
|.|||:||||.|||:|||||||||||...::..|||||||||::|:..|.
BPUM_2509___e 1 MSKKVVVLGESRDGKLRNVTFEAIAAAHQVADGGEVIGVLIGDDVKDQAN 50
BSNT_04162___ 51 ELIHYGADKVLTAEDPKLKTYTADGYSQVMRGVIEQENPDSVIFGHTAMG 100
||::||||.|:..|.|.|..||:||::|.::.:::|.:||:|:||||::|
BPUM_2509___e 51 ELLYYGADHVMIVEHPHLSYYTSDGFAQALQAILDQIDPDAVLFGHTSIG 100
BSNT_04162___ 101 KDLSPKLAARLQTGLISDAIDVSVTGGNVVFTRPIYSGKAFERVISTDPM 150
||||||:|||||||||||||||||||.::|||||||||||||:|||||.:
BPUM_2509___e 101 KDLSPKIAARLQTGLISDAIDVSVTGEHLVFTRPIYSGKAFEKVISTDRL 150
BSNT_04162___ 151 IFATIRPNNIQASEKDISRSGSIESINVSLTDLRTVIQEVVKKTADGVDL 200
:.|||||||:...|:|.||||.|..::|.:.:|||:::||:|||::||||
BPUM_2509___e 151 LLATIRPNNVAPLERDASRSGDITPVSVDIQNLRTIVKEVIKKTSEGVDL 200
BSNT_04162___ 201 SEAKIIVAGGRGVKSKEGFQPLQELAEVLGAAVGASRGACDADYCDYALQ 250
||||:||||||||||||||:||.||||.||||||||||||||||||||||
BPUM_2509___e 201 SEAKVIVAGGRGVKSKEGFEPLNELAETLGAAVGASRGACDADYCDYALQ 250
BSNT_04162___ 251 IGQTGKVVTPDLYIACGISGAIQHLAGMSNSKVIVAINKDPEADIFKIAD 300
|||||||||||||||||||||||||||||||||||||||||||:||||||
BPUM_2509___e 251 IGQTGKVVTPDLYIACGISGAIQHLAGMSNSKVIVAINKDPEAEIFKIAD 300
BSNT_04162___ 301 YGIVGDLFEVVPLLTEEFKQLNIHS 325
||||||||||||||.||.|::||||
BPUM_2509___e 301 YGIVGDLFEVVPLLNEELKKMNIHS 325
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