Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04156 and BPUM_2506

See DNA alignment / Visit BSNT_04156 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:40
# Commandline: needle
#    -asequence pep-align/BSNT_04156___uvrC.1.24716.seq
#    -bsequence pep-align/BPUM_2506___uvrC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04156___uvrC-BPUM_2506___uvrC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04156___uvrC-BPUM_2506___uvrC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04156___uvrC
# 2: BPUM_2506___uvrC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 590
# Identity:     497/590 (84.2%)
# Similarity:   556/590 (94.2%)
# Gaps:           0/590 ( 0.0%)
# Score: 2661.0
# 
#
#=======================================

BSNT_04156___      1 MNKQLKEKLALLPDQPGCYLMKDRQQTVIYVGKAKVLKNRVRSYFTGSHD     50
                     |||.:||||::||||||||||||||.|||||||||:||||||||||||||
BPUM_2506___u      1 MNKLIKEKLSVLPDQPGCYLMKDRQNTVIYVGKAKILKNRVRSYFTGSHD     50

BSNT_04156___     51 AKTQRLVTEIEDFEYIVTSSNLEALILEMNLIKKHDPKYNVMLKDDKTYP    100
                     |||||||:|||||||||||||:||||||:|||||:|||||||||||||||
BPUM_2506___u     51 AKTQRLVSEIEDFEYIVTSSNIEALILELNLIKKYDPKYNVMLKDDKTYP    100

BSNT_04156___    101 FIKLTHERHPRLIVTRNVKKDKGRYFGPYPNVQAARETKKLLDRLYPLRK    150
                     |||:|:||||:|||||:||||||:||||||||||||||||||||||||||
BPUM_2506___u    101 FIKITNERHPKLIVTRHVKKDKGKYFGPYPNVQAARETKKLLDRLYPLRK    150

BSNT_04156___    151 CSKLPDRVCLYYHLGQCLAPCVKDISEETNRELVESITRFLRGGYNEVKK    200
                     |:.|||||||||||||||||||.|||||||::||:.|.|||.||:.::||
BPUM_2506___u    151 CATLPDRVCLYYHLGQCLAPCVYDISEETNKQLVDEIIRFLNGGHQQIKK    200

BSNT_04156___    201 ELEEKMHEAAENLEFERAKELRDQIAHIESTMEKQKMTMNDLVDRDVFAY    250
                     ||.|||.||||.||||||||||||||:|:||||||||||:||.|||||||
BPUM_2506___u    201 ELTEKMQEAAEQLEFERAKELRDQIAYIDSTMEKQKMTMSDLSDRDVFAY    250

BSNT_04156___    251 AYDKGWMCVQVFFIRQGKLIERDVSMFPLYQEADEEFLTFIGQFYSKNNH    300
                     |||||||||||||||||||||||||:||:||:.:||||||:|||||||||
BPUM_2506___u    251 AYDKGWMCVQVFFIRQGKLIERDVSLFPMYQDPEEEFLTFMGQFYSKNNH    300

BSNT_04156___    301 FLPKEILVPDSVDQSMIEQLLETNVHQPKKGPKKELLMLAHKNAKIALKE    350
                     ||||||||||||||.||||||||||||||||.||:||:|||:||||||||
BPUM_2506___u    301 FLPKEILVPDSVDQEMIEQLLETNVHQPKKGKKKDLLLLAHQNAKIALKE    350

BSNT_04156___    351 KFSLIERDEERSIGAVQKLGEALNIYTPHRIEAFDNSNIQGTNPVSAMIV    400
                     ||||||||||||||||::||:|||||.|:||||||||||||.:|||||:|
BPUM_2506___u    351 KFSLIERDEERSIGAVKQLGDALNIYMPYRIEAFDNSNIQGADPVSAMVV    400

BSNT_04156___    401 FIDGKPYKKEYRKYKIKTVTGPDDYGSMREVVRRRYTRVLRENLPLPDLI    450
                     |.|||||||||||||||||||||||.|||||:||||||||::.|||||||
BPUM_2506___u    401 FQDGKPYKKEYRKYKIKTVTGPDDYASMREVIRRRYTRVLKDELPLPDLI    450

BSNT_04156___    451 IIDGGKGQINAARDVIENELGLDIPIAGLAKDEKHRTSNLLIGDPLEVVY    500
                     :|||||||||||.||:||||.|.:|:|||.||||||||||::||.||:|.
BPUM_2506___u    451 LIDGGKGQINAAIDVLENELNLSVPVAGLVKDEKHRTSNLMMGDTLEIVA    500

BSNT_04156___    501 LERNSQEFYLLQRIQDEVHRFAISFHRQIRGKSAFQSVLDDIPGIGEKRK    550
                     ||||||.|||||||||||||||||||||:|||:||||:|||:||||||||
BPUM_2506___u    501 LERNSQAFYLLQRIQDEVHRFAISFHRQLRGKNAFQSILDDVPGIGEKRK    550

BSNT_04156___    551 KMLLKHFGSVKKMKEASLEDIKKAGVPAAAAQLLYDKLQK    590
                     |.||||||||||||||::||.::||:|...|:||.:.|:|
BPUM_2506___u    551 KQLLKHFGSVKKMKEATIEDFQEAGIPKQTAELLIEALKK    590


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.