Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04150 and BPUM_2503
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:40
# Commandline: needle
# -asequence pep-align/BSNT_04150___sdhC.1.24716.seq
# -bsequence pep-align/BPUM_2503___sdhC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04150___sdhC-BPUM_2503___sdhC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04150___sdhC-BPUM_2503___sdhC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04150___sdhC
# 2: BPUM_2503___sdhC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 202
# Identity: 170/202 (84.2%)
# Similarity: 190/202 (94.1%)
# Gaps: 0/202 ( 0.0%)
# Score: 916.0
#
#
#=======================================
BSNT_04150___ 1 MSGNREFYFRRLHSLLGVIPVGIFLIQHLVVNQFAARGAEAFNSAAHFMD 50
||||:||::|||||||||||||:|||||||||.||..|.||||.|||||:
BPUM_2503___s 1 MSGNKEFFYRRLHSLLGVIPVGLFLIQHLVVNHFATSGPEAFNKAAHFME 50
BSNT_04150___ 51 SLPFRYALEIFIIFLPLIYHAVYGVYIAFTAKNNAGQYSYMRNWLFVLQR 100
.||||||||:|:|||||||||||||||||||:||..::||:|||||.|||
BPUM_2503___s 51 QLPFRYALELFVIFLPLIYHAVYGVYIAFTAQNNTSRFSYLRNWLFRLQR 100
BSNT_04150___ 101 VTGIITLIFVSWHVWETRIAAQMGAEVNFDMMANILSSPAMLGFYIVGVL 150
::|||||||||||||||||.||:|||||:||||||||||.||||||||||
BPUM_2503___s 101 ISGIITLIFVSWHVWETRIQAQLGAEVNYDMMANILSSPFMLGFYIVGVL 150
BSNT_04150___ 151 STIFHFSNGLWSFAVTWGITVTPRSQRISTYVTLIIFVALSYVGLKAIFA 200
||||||:||||||||:|||||:||||||||||||.||:|||||||:||||
BPUM_2503___s 151 STIFHFANGLWSFAVSWGITVSPRSQRISTYVTLGIFIALSYVGLRAIFA 200
BSNT_04150___ 201 FV 202
||
BPUM_2503___s 201 FV 202
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