Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04149 and BPUM_2502
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:39
# Commandline: needle
# -asequence pep-align/BSNT_04149___sdhA.1.24716.seq
# -bsequence pep-align/BPUM_2502___sdhA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04149___sdhA-BPUM_2502___sdhA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04149___sdhA-BPUM_2502___sdhA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04149___sdhA
# 2: BPUM_2502___sdhA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 586
# Identity: 532/586 (90.8%)
# Similarity: 557/586 (95.1%)
# Gaps: 0/586 ( 0.0%)
# Score: 2824.0
#
#
#=======================================
BSNT_04149___ 1 MSQSSIIVVGGGLAGLMATIKAAESGMAVKLFSIVPVKRSHSVCAQGGIN 50
||.|||||||||||||||||||||:|.|||||||||||||||||||||||
BPUM_2502___s 1 MSNSSIIVVGGGLAGLMATIKAAEAGTAVKLFSIVPVKRSHSVCAQGGIN 50
BSNT_04149___ 51 GAVNTKGEGDSPWEHFDDTVYGGDFLANQPPVKAMCEAAPSIIHLLDRMG 100
||||||||||||:|||||||||||||||||||||||||||||||||||||
BPUM_2502___s 51 GAVNTKGEGDSPYEHFDDTVYGGDFLANQPPVKAMCEAAPSIIHLLDRMG 100
BSNT_04149___ 101 VMFNRTPEGLLDFRRFGGTQHHRTAYAGATTGQQLLYALDEQVRRYEVAG 150
|||||||||||||||||||||||||:||||||||||||||||||||||||
BPUM_2502___s 101 VMFNRTPEGLLDFRRFGGTQHHRTAFAGATTGQQLLYALDEQVRRYEVAG 150
BSNT_04149___ 151 LVTKYEGWEFLGAVLDDDRTCRGIVAQNLTNMQIESFRSDAVIMATGGPG 200
|||||||||||||||||:..||||||||||.|:|||||||||||||||||
BPUM_2502___s 151 LVTKYEGWEFLGAVLDDEEVCRGIVAQNLTTMEIESFRSDAVIMATGGPG 200
BSNT_04149___ 201 IIFGKSTNSMINTGSAASIVYQQGAYYANGEFIQIHPTAIPGDDKLRLMS 250
|:|||||||||||||||||||||||:||||||||||||||||||||||||
BPUM_2502___s 201 IVFGKSTNSMINTGSAASIVYQQGAHYANGEFIQIHPTAIPGDDKLRLMS 250
BSNT_04149___ 251 ESARGEGGRVWTYKDGKPWYFLEEKYPAYGNLVPRDIATREIFDVCVNQK 300
|||||||||||||||||||||||||||||||||||||||||||||||.||
BPUM_2502___s 251 ESARGEGGRVWTYKDGKPWYFLEEKYPAYGNLVPRDIATREIFDVCVEQK 300
BSNT_04149___ 301 LGINGENMVYLDLSHKDPKELDIKLGGIIEIYEKFMGDDPRKLPMKIFPA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_2502___s 301 LGINGENMVYLDLSHKDPKELDIKLGGIIEIYEKFMGDDPRKLPMKIFPA 350
BSNT_04149___ 351 VHYSMGGLWVDYDQMTNIPGLFAAGECDYSMHGGNRLGANSLLSAIYGGM 400
||||||||||||||||||.|||||||||||||||||||||||||||||||
BPUM_2502___s 351 VHYSMGGLWVDYDQMTNIKGLFAAGECDYSMHGGNRLGANSLLSAIYGGM 400
BSNT_04149___ 401 VAGPNAVKYVNGLESSAEDMSSSLFDAHVKKEEEKWADIMSMDGTENAYV 450
|||||||||::|||.||||:||:.||:.||||:|||.:|:||||||||||
BPUM_2502___s 401 VAGPNAVKYISGLEKSAEDLSSATFDSAVKKEQEKWDNILSMDGTENAYV 450
BSNT_04149___ 451 LHKELGEWMTANVTVVRHNDKLLKTDDKIQELMERFKKININDTTKWSNQ 500
||||||||||.||||||:||||||||.||:|||||:|:||||||..||||
BPUM_2502___s 451 LHKELGEWMTDNVTVVRYNDKLLKTDQKIEELMERYKQININDTASWSNQ 500
BSNT_04149___ 501 GAMFTRQFSNMLQLARVITLGAYNRNESRGAHYKPDYPERNDDEWLKTTM 550
||.||||..||||||||||:||||||||||||||||:|||||:|:|||||
BPUM_2502___s 501 GAAFTRQLDNMLQLARVITIGAYNRNESRGAHYKPDFPERNDEEFLKTTM 550
BSNT_04149___ 551 AKHVSPYEAPEFEYQDVDVSLITPRKRDYSKKKVAK 586
|......:.|.|.|:|||||||.|||||||||||.|
BPUM_2502___s 551 ATFKGKNQKPAFHYEDVDVSLIAPRKRDYSKKKVEK 586
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