Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04148 and BPUM_2501

See DNA alignment / Visit BSNT_04148 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:39
# Commandline: needle
#    -asequence pep-align/BSNT_04148___sdhB.1.24716.seq
#    -bsequence pep-align/BPUM_2501___sdhB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04148___sdhB-BPUM_2501___sdhB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04148___sdhB-BPUM_2501___sdhB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04148___sdhB
# 2: BPUM_2501___sdhB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 254
# Identity:     225/254 (88.6%)
# Similarity:   240/254 (94.5%)
# Gaps:           1/254 ( 0.4%)
# Score: 1233.0
# 
#
#=======================================

BSNT_04148___      1 MSEQKTIRFIITRQDTADSTPYDEEFEIPYRPNLNVISALMEIRRNPVNV     50
                     |||:.||:||||||||||..|||||||||||||:|||||||||||||||.
BPUM_2501___s      1 MSEKNTIQFIITRQDTADGKPYDEEFEIPYRPNMNVISALMEIRRNPVNK     50

BSNT_04148___     51 KGEKTTPVTWDMNCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLKPM    100
                     :|||||.:.||||||||||||||||||||||||||||||:|||||||:||
BPUM_2501___s     51 QGEKTTAINWDMNCLEEVCGACSMVINGKPRQSCTALIDKLEQPIRLQPM    100

BSNT_04148___    101 KTFPVVRDLQVDRSRMFDSLKKVKAWIPIDGTYDLGPGPRMPEKRRQWAY    150
                     |||||||||||||||||:||||||||:|||||||||||||||||:|||||
BPUM_2501___s    101 KTFPVVRDLQVDRSRMFNSLKKVKAWVPIDGTYDLGPGPRMPEKKRQWAY    150

BSNT_04148___    151 ELSKCMTCGVCLEACPNVNSKSKFMGPAPMSQVRLFNAHPTGAMNKSERL    200
                     |||||||||||||||||||.||.||||||:|||||||||||||||||:||
BPUM_2501___s    151 ELSKCMTCGVCLEACPNVNDKSSFMGPAPLSQVRLFNAHPTGAMNKSDRL    200

BSNT_04148___    201 EALMDEGGLADCGNSQNCVQSCPKGIPLTTSIAALNRDTNLQAFRNFFGS    250
                     |.:|.:||||:||||||||||||||||||||||||||||.||||||||||
BPUM_2501___s    201 EEIMGDGGLANCGNSQNCVQSCPKGIPLTTSIAALNRDTTLQAFRNFFGS    250

BSNT_04148___    251 DRV-    253
                     |.. 
BPUM_2501___s    251 DHAE    254


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