Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04146 and BPUM_2500

See DNA alignment / Visit BSNT_04146 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:39
# Commandline: needle
#    -asequence pep-align/BSNT_04146___ysmA.1.24716.seq
#    -bsequence pep-align/BPUM_2500___ysmA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04146___ysmA-BPUM_2500___ysmA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04146___ysmA-BPUM_2500___ysmA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04146___ysmA
# 2: BPUM_2500___ysmA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 153
# Identity:      92/153 (60.1%)
# Similarity:   119/153 (77.8%)
# Gaps:           6/153 ( 3.9%)
# Score: 497.5
# 
#
#=======================================

BSNT_04146___      1 MKLPAYIDMPFQEWKTSFSFFNEVSVRFSETDMFGHMNNVTPFIYFEEAR     50
                     |:||:||:.||:||:.||.|:.|.:||||||||||||||||||:||||||
BPUM_2500___y      1 MRLPSYIEEPFEEWRASFRFYVETTVRFSETDMFGHMNNVTPFVYFEEAR     50

BSNT_04146___     51 ISYFKKLNM----MSENKQTMTVVASQQCDYLRQVMPYEELRIYVKTSTV     96
                     |::|:|..:    |...::||||||:.||||::||...|.||:|||...|
BPUM_2500___y     51 IAFFQKTGIVDKRMKRVRETMTVVANLQCDYIKQVEIGERLRVYVKPEKV    100

BSNT_04146___     97 GSSSLTLHYLGENREGEPCFTGAVVMVQVSKESGKAVSWTDEEKETLLHT    146
                     |||||.|||||||.:.||||||:|.|||:||::|.:|.:|::||||....
BPUM_2500___y    101 GSSSLILHYLGENEQQEPCFTGSVTMVQISKDTGTSVPFTEDEKETFQAQ    150

BSNT_04146___    147 R--    147
                     |  
BPUM_2500___y    151 RNE    153


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