Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04141 and BPUM_2492
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:39
# Commandline: needle
# -asequence pep-align/BSNT_04141___gerM.1.24716.seq
# -bsequence pep-align/BPUM_2492___gerM.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04141___gerM-BPUM_2492___gerM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04141___gerM-BPUM_2492___gerM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04141___gerM
# 2: BPUM_2492___gerM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 366
# Identity: 255/366 (69.7%)
# Similarity: 298/366 (81.4%)
# Gaps: 13/366 ( 3.6%)
# Score: 1288.5
#
#
#=======================================
BSNT_04141___ 1 MLKKGPAVIGATCLTSALLLSGCGLFQSDKAAEEIDPPQDVTFVNDEAGA 50
||||| :....||:.||:|||||||||:|:|..||||||:||:|.|
BPUM_2492___g 1 MLKKG-STAAVTCIASAMLLSGCGLFQTDQAKTEIDPPQNVTYVKD---- 45
BSNT_04141___ 51 NSNTTAAKKTESEKSDTAKADQASSTVMRELYLIDKNGYVVAQTLPLPKS 100
....|:|..|..:..||| ||||||||||||||||:|::||||:
BPUM_2492___g 46 ---NKEDKQTAKEGKEEKKAD----TVMRELYLIDKNGYVVSQSIPLPKN 88
BSNT_04141___ 101 ESTAKQALEYLVQGGPVSEILPNGFRAVLPADTTVNVDIKKDGTAIADFS 150
|.:|||.|||||.|||:|.::||||||||||||.|:||| |||||:.|||
BPUM_2492___g 89 EGSAKQTLEYLVDGGPISNLMPNGFRAVLPADTNVSVDI-KDGTAVVDFS 137
BSNT_04141___ 151 NEFKNYKKEDEQKIVQSVTWTLTQFSSIDKVKLRINGHELKEMPVGGTPI 200
||||||||||||:|:||||||||||.|:.||||::||||||||||.||||
BPUM_2492___g 138 NEFKNYKKEDEQRILQSVTWTLTQFDSVAKVKLKMNGHELKEMPVNGTPI 187
BSNT_04141___ 201 SDDLSRKDGINLETAGVNDLTATHPLTVYYLAENEDSEYYVPVTKRIDNS 250
||||||:||||::.....|:|:|.|:|||||||:::..||||||||....
BPUM_2492___g 188 SDDLSREDGINIQHEVAADMTSTKPVTVYYLAESDEQTYYVPVTKRAPKD 237
BSNT_04141___ 251 EKDDITAAINELAKGPSKVSGLLTDFSEDVKLVSKPKIKDGRVTLDFNQS 300
|.|.|||||:||..||||.|.|||||.:||||...||:|||.||||||:|
BPUM_2492___g 238 EDDQITAAIDELVSGPSKKSHLLTDFDQDVKLNDIPKVKDGHVTLDFNES 287
BSNT_04141___ 301 IFGSADEKTKMISSEVLNSIVLTLTEQPDVKSVSVKVNGKSELVNEKGEK 350
||||||||.|:||.:||:||||||||.|||||||||||||:|||||||.:
BPUM_2492___g 288 IFGSADEKKKVISQKVLDSIVLTLTELPDVKSVSVKVNGKAELVNEKGTE 337
BSNT_04141___ 351 LTEPVSRPSQVNTGSF 366
||:|||||.|||||||
BPUM_2492___g 338 LTKPVSRPEQVNTGSF 353
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