Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04138 and BPUM_2490
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:39
# Commandline: needle
# -asequence pep-align/BSNT_04138___ysnA.1.24716.seq
# -bsequence pep-align/BPUM_2490___ysnA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04138___ysnA-BPUM_2490___ysnA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04138___ysnA-BPUM_2490___ysnA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04138___ysnA
# 2: BPUM_2490___ysnA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 197
# Identity: 154/197 (78.2%)
# Similarity: 173/197 (87.8%)
# Gaps: 2/197 ( 1.0%)
# Score: 788.0
#
#
#=======================================
BSNT_04138___ 1 MKEAIIATHNPGKVKEFKEILEPRGYDVKSLAEIGFTEEIEETGHTFEEN 50
||.|||||||.||.||||.||||:|:.||:||:|||.|||||||||||||
BPUM_2490___y 1 MKTAIIATHNAGKAKEFKAILEPKGFTVKTLADIGFIEEIEETGHTFEEN 50
BSNT_04138___ 51 AILKAEAVAKAVNKMVIADDSGLSIDNLGGRPGVYSARYAGEQKDDQANI 100
|::||||:.....:||||||||||||.|||:|||||||||||.|:|..|:
BPUM_2490___y 51 AVIKAEAIQAKAGEMVIADDSGLSIDYLGGKPGVYSARYAGEHKNDAENV 100
BSNT_04138___ 101 EKVLSELKGIEKEQRTARFRCALAVSIPGEETKTVEGHVEGYIAEEPRGE 150
|||||||:|||||.|||||||||||||||:|||||||.|||:|||||.||
BPUM_2490___y 101 EKVLSELQGIEKEDRTARFRCALAVSIPGKETKTVEGSVEGFIAEEPIGE 150
BSNT_04138___ 151 YGFGYDPIFIVKDKDKTMAELTSDEKNKISHRADALKKLSKLLEA-- 195
.||||||||||||||:|||||:.:|||||||||.||:|||.||:|
BPUM_2490___y 151 NGFGYDPIFIVKDKDQTMAELSPEEKNKISHRAVALQKLSSLLDANE 197
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