Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04136 and BPUM_2489
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:39
# Commandline: needle
# -asequence pep-align/BSNT_04136___ysnB.1.24716.seq
# -bsequence pep-align/BPUM_2489___ysnB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04136___ysnB-BPUM_2489___ysnB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04136___ysnB-BPUM_2489___ysnB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04136___ysnB
# 2: BPUM_2489___ysnB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 174
# Identity: 123/174 (70.7%)
# Similarity: 141/174 (81.0%)
# Gaps: 5/174 ( 2.9%)
# Score: 652.0
#
#
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BSNT_04136___ 1 MNVLIISDSHGLEEELQTIAKRHEAEVDLMIHCGDSELETRHPALEPYAV 50
|.:|||||||||.:|||.|||||.||||:|||||||||||.|||||.|.|
BPUM_2489___y 1 MKILIISDSHGLTDELQMIAKRHAAEVDMMIHCGDSELETNHPALEGYKV 50
BSNT_04136___ 51 VKGNCDFAGDFKDELLLTA-GSRKILVTHGHLHGIKQTLLNVYYRAEELG 99
|||||||.|||::||||.. |..|:.:||||||||||:||.|||||||||
BPUM_2489___y 51 VKGNCDFMGDFEEELLLPLDGGGKLFLTHGHLHGIKQSLLQVYYRAEELG 100
BSNT_04136___ 100 ADVICFGHSHIAGSEVLRGKLMINPGSIRLPRVRRTESYAILTLENDAAT 149
||:||||||||.|||:|||||:|||||:.|||||:..|||||||:...|.
BPUM_2489___y 101 ADIICFGHSHIPGSELLRGKLLINPGSVHLPRVRKERSYAILTLDGSEAN 150
BSNT_04136___ 150 VRFYDQAGNEIEDLQNRVTL---- 169
|:|:...|..|:||:|.|||
BPUM_2489___y 151 VQFFTDEGQAIQDLENTVTLEGIS 174
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