Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06021 and BPUM_2488

See DNA alignment / Visit BSNT_06021 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:34
# Commandline: needle
#    -asequence pep-align/BSNT_06021___gdh.1.24716.seq
#    -bsequence pep-align/BPUM_2488.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06021___gdh-BPUM_2488.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06021___gdh-BPUM_2488.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06021___gdh
# 2: BPUM_2488
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 342
# Identity:      78/342 (22.8%)
# Similarity:   120/342 (35.1%)
# Gaps:         111/342 (32.5%)
# Score: 229.0
# 
#
#=======================================

BSNT_06021___      0 --------------------------------------------------      0
                                                                       
BPUM_2488          1 MTQESDERKLQQIKQMQQMFLEKMKTQPYPMYPNYGKITRYEEIPINLPE     50

BSNT_06021___      1 ----------------------------MMKKKNIMITGANSGIGFAAVK     22
                                                 .:..|..:|||.:||||.|...
BPUM_2488         51 QRQLRHPGVEGLMVPLPIIENTNYKGSGKLAGKVALITGGDSGIGAAVAI    100

BSNT_06021___     23 QFLTEGFRVVGVDIQTNKMSEFIVNSEFHMEKA--------------DLS     58
                     .|..|     ..|:....:.|   :.:.:..||              ||.
BPUM_2488        101 AFAKE-----SADVAIAYLDE---HEDANRTKARIEELGQRCLLMPGDLR    142

BSNT_06021___     59 DVRQAESLMLKLEKS--RLIPDILINAAGIREITP-VLELSAESFKKVID    105
                     |.||..:::.|..|:  ||  |:|.|..||:...| :|.:..|.|.....
BPUM_2488        143 DKRQCITIVEKTIKTFGRL--DVLCNHVGIQFQQPSLLNIIDEQFDDTFK    190

BSNT_06021___    106 INLTAAFILSRDAARLWSKLGKRGCIINIASVSGLMAEPARAAYVSSKHA    155
                     :|:.:.|..:| ||..:.|.|  ..||..:||...:.|.....|.::|.|
BPUM_2488        191 VNIYSHFYTTR-AALPYLKPG--SSIIGTSSVVTYVGEQQMIDYTATKGA    237

BSNT_06021___    156 IIGLTKQLAMEFGSKGIRVNSISPGVIQTELTEEYFQDDEMVQLIKDNHA    205
                     |:|.|:.||.....:|||||:::||.|.|.|....|..|: |.:....:.
BPUM_2488        238 IVGWTRALAKNVVKQGIRVNAVAPGRIWTPLIAASFSSDQ-VGVYGAFNP    286

BSNT_06021___    206 LHTWGQPSDIVSCMKYLASDEAHFITGSNFVIDGGWTAGKKL    247
                     :.....|.::.....|||||::.|:||....:|||.:...  
BPUM_2488        287 MERVAHPFELAPTFVYLASDDSRFVTGQVLHVDGGESTHS--    326


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