Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06029 and BPUM_2484
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:35
# Commandline: needle
# -asequence pep-align/BSNT_06029___yxiD.1.24716.seq
# -bsequence pep-align/BPUM_2484.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06029___yxiD-BPUM_2484.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06029___yxiD-BPUM_2484.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06029___yxiD
# 2: BPUM_2484
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 539
# Identity: 220/539 (40.8%)
# Similarity: 307/539 (57.0%)
# Gaps: 96/539 (17.8%)
# Score: 1093.5
#
#
#=======================================
BSNT_06029___ 0 -------------------------------------------------- 0
BPUM_2484 1 MKTIDVFELKNGIDQTLNKLKQQSQNVKSLEKQINQIISLDSALKGEAGQ 50
BSNT_06029___ 1 ------------------MFIDEYKKVLKQTQHAISSVESDSHGMIAEAF 32
:.|:||...||:|:.|:.:.||:.:|.|:::|
BPUM_2484 51 AIKDFYMECHIPFLQFFQIVIEEYSGALKKTKQALHAFESNPNGFISQSF 100
BSNT_06029___ 33 LSHDARHGVKHAREVTEQLTDAVNRQTSAIGHIVSLPAVNDTFFRMETEQ 82
:..:...|:|.|......:...||:....:.|||.||.|:::.|:...::
BPUM_2484 101 IEQELDQGLKKAERTISDIVSDVNQAIGRVNHIVHLPHVDESTFQQSYQK 150
BSNT_06029___ 83 AERLITDTLHKLFQFDGQQTQAL-EAKSDFQTMKKYIDQLETMYTGPKIE 131
|....:.|:..|..||.:||.|| |.||...|||:|||.|..|:||||||
BPUM_2484 151 AWLETSKTIGLLHAFDREQTSALNETKSALHTMKQYIDTLSKMFTGPKIE 200
BSNT_06029___ 132 ITGYKSGSILKSQEQENINQTFGAINPQMKQPDDSPMEMMLKKLAENEKS 181
||.|:.|||.|..::|.|:.....:|.::..|.::||.:||.||.:.|:|
BPUM_2484 201 ITSYQKGSIFKDGKEEKISSNISGLNKKIDDPKENPMTIMLNKLNDKEQS 250
BSNT_06029___ 182 KVDSVVKTGHSKKVSKNIIVINGKVYNTSEHREHIKTDFSNAEVKQVVYN 231
.||::||...|.|:::|.:.:|||||||:| |.||:||:..:|:.:
BPUM_2484 251 NVDTLVKKKPSNKINQNAVFVNGKVYNTNE-----KIDFANAKTVEVIRD 295
BSNT_06029___ 232 DTLYNVYISG-NDMKLEPVVSLSDIKVDENGYVKILEAAVELTGVYDLFK 280
..||.:.|:. |.:.:|.:..:||:|...| ||..|||.||:.|..:
BPUM_2484 296 GMLYRLRITDQNKVNIESITKISDLKQTSN----ILYTAVEFTGINDAIR 341
BSNT_06029___ 281 AATGRDPVSGEKVTGKDRVVASINSVPFAKIAKLEKLIDINKLINDGKKA 330
..||||||:|:||...||:|:|:..:|.|||||:.|. :.|::...|.:
BPUM_2484 342 VITGRDPVTGDKVADMDRLVSSLYMIPGAKIAKVGKY--VFKIMKGEKGS 389
BSNT_06029___ 331 KKASEVKNVAKDTGNGVPSYGKKSVPKGPYREVHGFPVKVKPGAQEKHIP 380
|| :.| .||:||.||||||||||:|||||||||||||||.
BPUM_2484 390 KK------IVK-----TPSFGKHSVPKGPYREVNGFPVKVKPGAQEKHIS 428
BSNT_06029___ 381 NTPNYKQEIANGKNKSIFYGDNKTAQELLDKFAGKGQLLPNGKKERVDFG 430
:.||||||:||||.|||||||||.||||||||||||.:... .:||::||
BPUM_2484 429 DAPNYKQEVANGKTKSIFYGDNKKAQELLDKFAGKGDMFTK-NRERINFG 477
BSNT_06029___ 431 KPIGKYYDRDTGEYIETTRGMIHYGKDGAHIVPSEPLKK 469
:.||||||..:..|:|||.|:||||||||||||:.|
BPUM_2484 478 QVIGKYYDHKSKTYVETTNGLIHYGKDGAHIVPARP--- 513
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