Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05895 and BPUM_2476
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:27
# Commandline: needle
# -asequence pep-align/BSNT_05895___dltD.1.24716.seq
# -bsequence pep-align/BPUM_2476___dltD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05895___dltD-BPUM_2476___dltD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05895___dltD-BPUM_2476___dltD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05895___dltD
# 2: BPUM_2476___dltD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 395
# Identity: 244/395 (61.8%)
# Similarity: 318/395 (80.5%)
# Gaps: 10/395 ( 2.5%)
# Score: 1362.0
#
#
#=======================================
BSNT_05895___ 1 MKKRFFGPIILAFILFAGAIAIPSSWLTGFITDKRVKESATALNPSMFQG 50
||||||||:|||.:||.|.:.:|::||:..|...::::|||.|:|.||||
BPUM_2476___d 1 MKKRFFGPLILAAVLFIGVLLVPNAWLSHLIPKDKLQKSATELDPGMFQG 50
BSNT_05895___ 51 LYLQDQMLKDPTYLPIYGSSELSRLDEFHPSNYFQVNNEGFTPYLVGKGG 100
|||||:||||||||||||||||||.|.:||||:|..|.:||||||:||||
BPUM_2476___d 51 LYLQDEMLKDPTYLPIYGSSELSRFDPYHPSNFFHENPQGFTPYLIGKGG 100
BSNT_05895___ 101 SQSLIHSLNFAAHMDQLKGKKIVFIVSPQWFIKRGSDEQHFAPNYSALQG 150
||||||::|||||||:|||||:|||||||||:|.||||.||||||||||.
BPUM_2476___d 101 SQSLIHAMNFAAHMDELKGKKLVFIVSPQWFVKGGSDENHFAPNYSALQA 150
BSNT_05895___ 151 LDLAFNDQIDPEIKKKMMKRMLRFKAVQNDAILSELYKAMVNGQTWKVNA 200
|:||:|.:|||.:||:::||::.||||:||.:::||:||.::|..:...|
BPUM_2476___d 151 LNLAYNKEIDPTVKKELIKRIMTFKAVKNDMVITELFKAELSGNKFAYGA 200
BSNT_05895___ 201 LKPAAKVYYSMLEKKDLYYSTTESSGPKRYI--SQSVKDKSWSELNKLAD 248
:.|.||:||.||:|||:|| |..||.:|.: |.|||.|:||||.|.|.
BPUM_2476___d 201 ISPIAKMYYGMLQKKDMYY--TIGSGHERNLKPSPSVKGKTWSELEKEAS 248
BSNT_05895___ 249 QSGKRHSGSNDFHIDNPVY-KKLKPKVPKLKGKNKGRSYAVSPEYGDFEM 297
..|.:.:|:|.|:|:..:: :||||.:.|:|...:..|||.||||.||::
BPUM_2476___d 249 VLGAKKAGNNPFYINQKLFERKLKPIMKKMKDSREDHSYAESPEYKDFQI 298
BSNT_05895___ 298 MLDILKDAGAEPMFVTIPVNGKWYDYTGFPKKGRTDYYKKVNKQIRAKGF 347
||||||.|||:|:||||||||||||||||||:|||:||:|:|:|||..|:
BPUM_2476___d 299 MLDILKQAGAKPLFVTIPVNGKWYDYTGFPKEGRTEYYEKINRQIRDNGY 348
BSNT_05895___ 348 QVADFSGHEYDPYFMKDTIHIGWKGWVYVDKAIDEFYKTGKVTSS 392
:|||.:.|||||||.|||||:.:|||||:||||::||...
BPUM_2476___d 349 EVADLTKHEYDPYFFKDTIHVSYKGWVYIDKAIEKFYTEQ----- 388
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