Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04109 and BPUM_2469

See DNA alignment / Visit BSNT_04109 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:38
# Commandline: needle
#    -asequence pep-align/BSNT_04109___leuA.1.24716.seq
#    -bsequence pep-align/BPUM_2469___leuA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04109___leuA-BPUM_2469___leuA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04109___leuA-BPUM_2469___leuA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04109___leuA
# 2: BPUM_2469___leuA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 518
# Identity:     408/518 (78.8%)
# Similarity:   446/518 (86.1%)
# Gaps:          22/518 ( 4.2%)
# Score: 2105.0
# 
#
#=======================================

BSNT_04109___      1 ---------------------MNTQEKLAIAKQLERLGADIIEAGFPASS     29
                                          :|.||||.|||||||||.:||||||||||
BPUM_2469___l      1 MRKINFFDTTLRDGEQSPGVNLNAQEKLIIAKQLERLGVNIIEAGFPASS     50

BSNT_04109___     30 RGDFLAVQEIARTIKNCSVTGLARCVKGDIDAAWEALKDGAYPRIHVFIA     79
                     |||||.|||||||||||||.||||||||||||||||||||..||:|||||
BPUM_2469___l     51 RGDFLGVQEIARTIKNCSVAGLARCVKGDIDAAWEALKDGVEPRLHVFIA    100

BSNT_04109___     80 TSDIHLKHKLKMTREQVIERAVEMVTYAKERFPVVQWSAEDACRTELPFL    129
                     |||||||||||.|||:|:|:||.||.|||||||||||||||||||:|.||
BPUM_2469___l    101 TSDIHLKHKLKKTREEVVEQAVAMVKYAKERFPVVQWSAEDACRTDLDFL    150

BSNT_04109___    130 AEIVEKVIDAGASVINLPDTVGYLAPAEYGNIFKYMKENVPNIHKAKLSA    179
                     ||||||||||||||||||||||||||.|||||||||||:||||.:..|||
BPUM_2469___l    151 AEIVEKVIDAGASVINLPDTVGYLAPKEYGNIFKYMKEHVPNIDRVNLSA    200

BSNT_04109___    180 HCHDDLGMAVANSLAAIENGADQIECAVNGIGERAGNAALEEIAVALHTR    229
                     |||||||||||||||||||||||||.||||||||||||||||||||||.|
BPUM_2469___l    201 HCHDDLGMAVANSLAAIENGADQIETAVNGIGERAGNAALEEIAVALHIR    250

BSNT_04109___    230 KDFYQVETGITLNEIKRTSDLVSKLTGMAVPRNKAVVGDNAFAHESGIHQ    279
                     |||||||:.|.|||||||||:|||.:||.|||||||||:|||||||||||
BPUM_2469___l    251 KDFYQVESTIQLNEIKRTSDVVSKYSGMIVPRNKAVVGNNAFAHESGIHQ    300

BSNT_04109___    280 DGFLKEKSTYEIISPELVGVTADALVLGKHSGRHAFKDRLTALGFQFDSE    329
                     |||||||:|||||||||||||.|.|||||||||||||||:..|||:...|
BPUM_2469___l    301 DGFLKEKTTYEIISPELVGVTTDVLVLGKHSGRHAFKDRMKTLGFKLTEE    350

BSNT_04109___    330 EINKFFTMFKELTEKKKEITDEDLVSLILEEKVTDRKIGYEFLSLQVHYG    379
                     ||||||..||.||||||||||:||:|:||||||.||||||||.|||||||
BPUM_2469___l    351 EINKFFETFKNLTEKKKEITDDDLISIILEEKVADRKIGYEFESLQVHYG    400

BSNT_04109___    380 TSQVPTATLSLKNQENAELIQEAATGAGSVEAIYNTLERCIDKDVELLDY    429
                     |.|:||||:||||||..|:|||||||||||||:|||||||:::.:.||||
BPUM_2469___l    401 TEQMPTATVSLKNQETQEVIQEAATGAGSVEAVYNTLERCMEERIHLLDY    450

BSNT_04109___    430 RIQSNRKGEDAFAQVYVRVLVNGKESAGRGIAQDVLEASAKAYLNAVNRQ    479
                     |||||.||.||.|:|||.|.:.|||:||||:||||||||||||:|||||.
BPUM_2469___l    451 RIQSNGKGRDALAEVYVTVSIEGKETAGRGVAQDVLEASAKAYVNAVNRH    500

BSNT_04109___    480 LVFQSNMSGLKNHTAVGS    497
                     |:|:||:..::.|.|:. 
BPUM_2469___l    501 LIFKSNLIEIEKHHAIS-    517


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.