Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04106 and BPUM_2466

See DNA alignment / Visit BSNT_04106 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:38
# Commandline: needle
#    -asequence pep-align/BSNT_04106___leuD.1.24716.seq
#    -bsequence pep-align/BPUM_2466___leuD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04106___leuD-BPUM_2466___leuD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04106___leuD-BPUM_2466___leuD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04106___leuD
# 2: BPUM_2466___leuD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 199
# Identity:     161/199 (80.9%)
# Similarity:   178/199 (89.4%)
# Gaps:           0/199 ( 0.0%)
# Score: 892.0
# 
#
#=======================================

BSNT_04106___      1 MEPLKSHTGKAAVLNRINVDTDQIIPKQFLKRIERTGYGRFAFFDWRYDA     50
                     ||||.:|.||||||||||||||||||||||||||||||||||||||||.|
BPUM_2466___l      1 MEPLVTHKGKAAVLNRINVDTDQIIPKQFLKRIERTGYGRFAFFDWRYLA     50

BSNT_04106___     51 NGEPNPEFELNQPVYQGASILIAGENFGCGSSREHAPWALDDYGFKIIIA    100
                     :|.|||:||||||:|:|:|||||||||||||||||||||||||||||:||
BPUM_2466___l     51 DGSPNPDFELNQPIYEGSSILIAGENFGCGSSREHAPWALDDYGFKIVIA    100

BSNT_04106___    101 PSFADIFHQNCFKNGMLPIRMPYDNWKQLVGQYENQSLQMTVDLEKQLIH    150
                     ||||||||||||||||||||:.||.||.....|||:..:||||||||.|.
BPUM_2466___l    101 PSFADIFHQNCFKNGMLPIRLDYDVWKTFAASYENKGYEMTVDLEKQQIE    150

BSNT_04106___    151 DSEGNQISFEVDPHWKEMLINGYDEISLTLLLEDEIKQFESQRSSWLQA    199
                     |.|||...|:|||||:|||:||||||||||||||:|:.||.:|||||:|
BPUM_2466___l    151 DHEGNITPFDVDPHWREMLLNGYDEISLTLLLEDDIQAFEDKRSSWLRA    199


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