Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04103 and BPUM_2465
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:37
# Commandline: needle
# -asequence pep-align/BSNT_04103___ysoA.1.24716.seq
# -bsequence pep-align/BPUM_2465___ysoA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04103___ysoA-BPUM_2465___ysoA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04103___ysoA-BPUM_2465___ysoA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04103___ysoA
# 2: BPUM_2465___ysoA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 340
# Identity: 231/340 (67.9%)
# Similarity: 276/340 (81.2%)
# Gaps: 11/340 ( 3.2%)
# Score: 1209.0
#
#
#=======================================
BSNT_04103___ 1 MTHDKKNAKIIPFPHLKDRLVEKGMSSLKEKKYQEALELFSEAMKY-DDT 49
|.||||...:|.||.||:||:||||::||:|:|||||.|||||..| ||.
BPUM_2465___y 1 MKHDKKKDNVILFPGLKERLIEKGMAALKDKQYQEALHLFSEAKSYDDDE 50
BSNT_04103___ 50 ESDLHLGMAICFLELGELEEAKSVCEKMLKEGYGHYFTVLQVYMTILIQL 99
|||:||||||||||||||::||.||||||.||||||||||||||||||||
BPUM_2465___y 51 ESDIHLGMAICFLELGELQDAKRVCEKMLHEGYGHYFTVLQVYMTILIQL 100
BSNT_04103___ 100 KKYEEVKSTIEAVLEENQLPAESAEQFYKLLDFSRKMTDP-----DREDE 144
|:|||||.|||||||||.|||||||.|||||:|||||.:. |.:|:
BPUM_2465___y 101 KEYEEVKQTIEAVLEENHLPAESAEHFYKLLEFSRKMIESPEQILDEDDD 150
BSNT_04103___ 145 AWAEEYEDTIDTEKVLASPEEQMNLIHSLKDRNVAKYTGLLKTILQDPSA 194
...| |:.:.:|..||||:..||||||||:..:.|||.||||.|..
BPUM_2465___y 151 DGGE-----INIDDMLERPEEQVQFIHSLKDRNITPHMGLLNTILQKPDG 195
BSNT_04103___ 195 HPIIKTMIVMLLTEHEYSKPVHISKFGESLTIEPSEIVPPDAAPILHRVL 244
:|::|::|:.||::|:.:||||::|||:|||:.|||.|.|:..|:|.:||
BPUM_2465___y 196 NPLVKSLILQLLSDHDVAKPVHVTKFGDSLTLVPSEAVKPEQMPLLQQVL 245
BSNT_04103___ 245 RVLDETLGNENPTLYAAVEELWRRHLYVLYPFQPKLLSADLWAAALHKVG 294
|.||:||||||||||..|||||||||:|||||.||....:||||||||||
BPUM_2465___y 246 RKLDDTLGNENPTLYQGVEELWRRHLFVLYPFLPKYTDPNLWAAALHKVG 295
BSNT_04103___ 295 YEMHGIEIESEELHMMYEFTDRELDEACTMLKDIEEISYL 334
||||||||:.||||::|||.:|||.|||||||||||||||
BPUM_2465___y 296 YEMHGIEIDLEELHLLYEFDERELREACTMLKDIEEISYL 335
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