Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04099 and BPUM_2462

See DNA alignment / Visit BSNT_04099 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:37
# Commandline: needle
#    -asequence pep-align/BSNT_04099___lonB.1.24716.seq
#    -bsequence pep-align/BPUM_2462___lonB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04099___lonB-BPUM_2462___lonB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04099___lonB-BPUM_2462___lonB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04099___lonB
# 2: BPUM_2462___lonB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 553
# Identity:     457/553 (82.6%)
# Similarity:   509/553 (92.0%)
# Gaps:           1/553 ( 0.2%)
# Score: 2387.0
# 
#
#=======================================

BSNT_04099___      1 MSWTGIALFIQLFFGIIIGLYFWNLLKNQRTQKVTIDKESKKEMEQLRKM     50
                     ||||||.|||||||||:|||||||||:||||||||||||||||||.||||
BPUM_2462___l      1 MSWTGIVLFIQLFFGIVIGLYFWNLLRNQRTQKVTIDKESKKEMEALRKM     50

BSNT_04099___     51 RAISLSEPLSEKVRPKSFKDIVGQEDGIKALKAALCGPNPQHVIVYGPPG    100
                     |:|.|||||||:||||.|:|||||||||:|||||||||||||||||||||
BPUM_2462___l     51 RSIKLSEPLSERVRPKGFQDIVGQEDGIRALKAALCGPNPQHVIVYGPPG    100

BSNT_04099___    101 VGKTAAARLVLEEAKKHKQSPFKEQAVFVELDATTARFDERGIADPLIGS    150
                     ||||||||||:||||:|..||||:.|||||||||||||||||||||||||
BPUM_2462___l    101 VGKTAAARLVMEEAKRHADSPFKKDAVFVELDATTARFDERGIADPLIGS    150

BSNT_04099___    151 VHDPIYQGAGAMGQAGIPQPKQGAVTHAHGGVLFIDEIGELHPIQMNKML    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_2462___l    151 VHDPIYQGAGAMGQAGIPQPKQGAVTHAHGGVLFIDEIGELHPIQMNKML    200

BSNT_04099___    201 KVLEDRKVFLDSAYYSEENTQIPNHIHDIFQNGLPADFRLIGATTRMPNE    250
                     ||||||||||||||||||||||||||||||||||||||||||||||.|:|
BPUM_2462___l    201 KVLEDRKVFLDSAYYSEENTQIPNHIHDIFQNGLPADFRLIGATTRTPDE    250

BSNT_04099___    251 IPPAIRSRCLEVFFRELEKDELKTVAKTAADKIEKNISEEGLDLLTSYTR    300
                     |||||||||||:||::|::.|||.||..|..||:|.:|:|||:|||||.:
BPUM_2462___l    251 IPPAIRSRCLEIFFKDLDQHELKIVAAKAVQKIQKELSDEGLNLLTSYVK    300

BSNT_04099___    301 NGREAVNMIQIAAGMAVTENRKDITIEDIEWVIHSSQLTPKHEQKIGVEP    350
                     ||||||||:|||||||||||||||||||:|||||||||||::|||:..:|
BPUM_2462___l    301 NGREAVNMVQIAAGMAVTENRKDITIEDVEWVIHSSQLTPRYEQKVPEKP    350

BSNT_04099___    351 QVGIVNGLAVYGPNSGSLLEIEVSVTAAQDKGSINITGIAEEESIGSQSK    400
                     :||:||||||||||||:||||||::..|.:||||||||||||||||:|||
BPUM_2462___l    351 KVGVVNGLAVYGPNSGALLEIEVNICKALEKGSINITGIAEEESIGNQSK    400

BSNT_04099___    401 SIRRKSMAKGSVENVLTVLRTMGMKPSDYDIHINFPGGIPIDGPSAGIAM    450
                     ||||||||||||||||||||.:|::.::||||||||||.|||||||||||
BPUM_2462___l    401 SIRRKSMAKGSVENVLTVLRNLGIRTNEYDIHINFPGGAPIDGPSAGIAM    450

BSNT_04099___    451 AAGIFSAIHKIPIDNTVAMTGEISLNGLVKPIGGVIPKIKAAKQSGAKKV    500
                     |..||||||:||||:..||||||.|.|.||||||||||||||||:||..|
BPUM_2462___l    451 ATAIFSAIHQIPIDHLTAMTGEIGLQGQVKPIGGVIPKIKAAKQAGATTV    500

BSNT_04099___    501 IIPYENQQAILKQIDGIEIIAVKTFQEVLDEILVNPPTEQKP-FHIEINK    549
                     ||||:|||:|||:|:|:.|:.||.||||||:.|||||.|:|. ...|:.:
BPUM_2462___l    501 IIPYDNQQSILKEIEGVTIVPVKHFQEVLDQCLVNPPDEKKDGLEDEMKR    550

BSNT_04099___    550 ESV    552
                     :||
BPUM_2462___l    551 KSV    553


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