Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04090 and BPUM_2456

See DNA alignment / Visit BSNT_04090 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:36
# Commandline: needle
#    -asequence pep-align/BSNT_04090___hemC.1.24716.seq
#    -bsequence pep-align/BPUM_2456___hemC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04090___hemC-BPUM_2456___hemC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04090___hemC-BPUM_2456___hemC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04090___hemC
# 2: BPUM_2456___hemC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 314
# Identity:     239/314 (76.1%)
# Similarity:   274/314 (87.3%)
# Gaps:           3/314 ( 1.0%)
# Score: 1244.0
# 
#
#=======================================

BSNT_04090___      1 MMRTIKVGSRRSKLAMTQTKWVIQKLKEINPSFVFEIKEIVTKGDRIVDV     50
                      ||||||||||||||:||||||||||.|:|||:.|||||||||||:|:||
BPUM_2456___h      1 -MRTIKVGSRRSKLAITQTKWVIQKLSELNPSYSFEIKEIVTKGDQILDV     49

BSNT_04090___     51 TLSKVGGKGLFVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPER    100
                     ||||||||||||||||||:||.:|||||||||||||.|||||||||||||
BPUM_2456___h     50 TLSKVGGKGLFVKEIEQAMLNHDIDMAVHSMKDMPAALPEGLVIGCIPER     99

BSNT_04090___    101 EDPRDALISKNRVKLSEMKEGAVIGTSSLRRSAQLLIERPDLTIKWIRGN    150
                     ||.|||||||:.:.|.|:.:||::||||||||||||.|||||.|||||||
BPUM_2456___h    100 EDVRDALISKDHLHLHELPKGAIVGTSSLRRSAQLLQERPDLNIKWIRGN    149

BSNT_04090___    151 IDTRLQKLETEDYDAIILAAAGLSRMGWKQDVVTEFLEPERCLPAVGQGA    200
                     |||||:||:.|:||||||||||||||||.::||:|||.||.|||||||||
BPUM_2456___h    150 IDTRLEKLKNEEYDAIILAAAGLSRMGWSKEVVSEFLSPETCLPAVGQGA    199

BSNT_04090___    201 LAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAMEGGCQVPIAGYS    250
                     |:||||..|||||.|.:|||:||||:|||||||||..|:|.||||||||:
BPUM_2456___h    200 LSIECRGDDEELLQLLAQFTNEYTKKTVLAERAFLKQMDGSCQVPIAGYA    249

BSNT_04090___    251 VLNGQDEIEMTGLVASPDGKIIFKETVTGNDPEEVGKRCAALMADRGAKD    300
                     .:|.:||||:||||||.||..|.:|||:|.|||.:|..||..|||:||||
BPUM_2456___h    250 TMNERDEIELTGLVASADGHTIIRETVSGTDPEAIGTACAKQMADKGAKD    299

BSNT_04090___    301 LIDRVKRELDEDGK    314
                     |||:||::|...  
BPUM_2456___h    300 LIDKVKKDLSSQ--    311


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