Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04089 and BPUM_2455

See DNA alignment / Visit BSNT_04089 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:36
# Commandline: needle
#    -asequence pep-align/BSNT_04089___hemD.1.24716.seq
#    -bsequence pep-align/BPUM_2455___hemD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04089___hemD-BPUM_2455___hemD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04089___hemD-BPUM_2455___hemD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04089___hemD
# 2: BPUM_2455___hemD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 265
# Identity:     147/265 (55.5%)
# Similarity:   188/265 (70.9%)
# Gaps:           5/265 ( 1.9%)
# Score: 724.5
# 
#
#=======================================

BSNT_04089___      1 MENDFPLKGKTVLVTRNKAQATSFQQKVEALGGKAVLTSLITFRRALPND     50
                     |.....|.|:|||||||:.||..||||:|.|.|.|:|||||.|...|.|:
BPUM_2455___h      1 MTIGQSLHGQTVLVTRNERQAGVFQQKIEELNGHAILTSLIRFEPTLTNE     50

BSNT_04089___     51 VAEQVREDLAAPGWLVFTSVNGADFFFSYLKENQLILP-AHKKIAAVGEK     99
                     .|:...:||....||||||||||.||.||::::.|... :|.|:||||||
BPUM_2455___h     51 KAQAFLKDLENSQWLVFTSVNGASFFLSYIEDHHLHKSLSHLKVAAVGEK    100

BSNT_04089___    100 TARRLQTHNVSVDVMPQEYIAEQLADALKQHAEPGEPITVMKGNLSRDVI    149
                     |:..|:.|.:.|||:|..:|||:|||||..|.:.||.:.|.||:|||||:
BPUM_2455___h    101 TSAYLEQHGLKVDVVPGRFIAEELADALLDHVQLGERVFVAKGHLSRDVV    150

BSNT_04089___    150 KQELVPLGFEVKEWVLYETIPDEEGIEALKDAAGQYSFDYVTFTSSSTVH    199
                     |:.|||||.|||||:||||:.|||||.|||....:.|||::|||||||||
BPUM_2455___h    151 KKTLVPLGIEVKEWILYETVKDEEGIAALKTEMTKQSFDFITFTSSSTVH    200

BSNT_04089___    200 TFMHVLGEELKKWKANGTACISIGPLTNDALLTYGITSHTPDTFTIDGML    249
                     :|||.:..:.....|:.|..::|||||.:|||.|||:|.||||:||||||
BPUM_2455___h    201 SFMHAMEADAANLAASDTCFVTIGPLTKEALLQYGISSETPDTYTIDGML    250

BSNT_04089___    250 GLMCSMSREEERI--    262
                     .|||.:|  |.::  
BPUM_2455___h    251 ELMCRLS--ERKLNK    263


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