Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04085 and BPUM_2452
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:36
# Commandline: needle
# -asequence pep-align/BSNT_04085___spoVID.1.24716.seq
# -bsequence pep-align/BPUM_2452___spoVID.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04085___spoVID-BPUM_2452___spoVID.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04085___spoVID-BPUM_2452___spoVID.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04085___spoVID
# 2: BPUM_2452___spoVID
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 599
# Identity: 242/599 (40.4%)
# Similarity: 304/599 (50.8%)
# Gaps: 200/599 (33.4%)
# Score: 957.5
#
#
#=======================================
BSNT_04085___ 1 MPQNHRLQFSVEESICFQKGQEVSELLSISLDPDIRVQEVNDYVSIIGSL 50
|.||:||||||||||.|:.||||||||||||||||.||||||||||.|||
BPUM_2452___s 1 MSQNNRLQFSVEESIYFKSGQEVSELLSISLDPDILVQEVNDYVSIRGSL 50
BSNT_04085___ 51 ELTGEYNIDQNKHTEEI--YTDKRFVEQVRKREDGSAELTHCFPVDITIP 98
||||||||:|.:...|: |...|..::|:.||||:|||.|.||||||||
BPUM_2452___s 51 ELTGEYNINQEELLGELSSYASYREADEVKVREDGTAELLHQFPVDITIP 100
BSNT_04085___ 99 KNKVSHLQDVFVFIDAFDYQLTDSRILTIQADLAIEGLLDDTQDKEPEIP 148
|||:|||.||||||||||||||::|:|||||||||||||| ::.|:.|
BPUM_2452___s 101 KNKISHLNDVFVFIDAFDYQLTENRLLTIQADLAIEGLLD---EETPQAP 147
BSNT_04085___ 149 LYEAPAAFREEELSEPSAHSVVEEPGASSAEEAVLQHEPPAEPPELFISK 198
: |.|..| .|...||.|..:.:..:
BPUM_2452___s 148 V-EEPYEF---------VHRSEEEYGDMTYDYQL---------------- 171
BSNT_04085___ 199 AGLREELETEKAESEPPESVASEPEAREDVKEEEESEELAVPETEVRAES 248
.||....|.|.::| |.|..||..|.:.:.|||.
BPUM_2452___s 172 ---------------QPEDEEQEEELQDD--EREIDEEQTVFQHDTRAEE 204
BSNT_04085___ 249 ETEESEPEPDPSEIEIQEIVKAKKETAEPAAAIADVREEADSPAETELRE 298
|.:| .|||| |:|..::|| .||:|
BPUM_2452___s 205 EKQE-------EEIEI-ELVSREEET-------------------EELKE 227
BSNT_04085___ 299 HAGAEESPALEAELHSETVIAEEKEETTESPNHEYALRQEAQNEEAAQSD 348
:||:|||
BPUM_2452___s 228 --------------------SEEREET----------------------- 234
BSNT_04085___ 349 QADPALCQEEAEADEALESVSEAALSIEDSRETASAVYVENDKADFHFHQ 398
||..|.||
BPUM_2452___s 235 -----------------ESQEEVAL------------------------- 242
BSNT_04085___ 399 KTSSEEASQEELPEPAYRTFLPE-QEEEDSFYSAPKLLEEEEQEEESFEI 447
.||: ||| |.:|..|:..||||:|||:|:..||:
BPUM_2452___s 243 ---------------GYRS-LPEAQVQEPPFFEPPKLLDEEEREDTLFEV 276
BSNT_04085___ 448 EVRKTPSAEEPKEET--PFQSFQLP----ESSETERKETDA--------- 482
||||.|...|.:||| |:..|:.| |..|.|..:.|.
BPUM_2452___s 277 EVRKDPEIAEEQEETVQPYPVFESPAYHVEEEEEEETQNDTYQLGRLYER 326
BSNT_04085___ 483 -VPRVAPAAETKEP------QTKESDNSLYLTKLFTK-EADEFSRMKICI 524
.|:|..:|:.:|. :|..|:|||||||||.| |.::||||||||
BPUM_2452___s 327 EAPKVYESAQEEEAFEEDVRETSGSENSLYLTKLFAKQEEEDFSRMKICI 376
BSNT_04085___ 525 VQQEDTIERLCERYEITSQQLIRMNSLALDDELKAGQILYIPQYKNSHA 573
||||||::|:||||::..|||:|.|||::|.||:.|||||||:|:.|:|
BPUM_2452___s 377 VQQEDTVDRICERYQLNVQQLLRTNSLSVDAELEEGQILYIPEYQKSNA 425
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