Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04084 and BPUM_2451

See DNA alignment / Visit BSNT_04084 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:35
# Commandline: needle
#    -asequence pep-align/BSNT_04084___ysxE.1.24716.seq
#    -bsequence pep-align/BPUM_2451___ysxE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04084___ysxE-BPUM_2451___ysxE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04084___ysxE-BPUM_2451___ysxE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04084___ysxE
# 2: BPUM_2451___ysxE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 344
# Identity:     192/344 (55.8%)
# Similarity:   245/344 (71.2%)
# Gaps:           4/344 ( 1.2%)
# Score: 1047.0
# 
#
#=======================================

BSNT_04084___      1 MEDTQSVLQEYGLTAQFIEPVSPLVWKVYTDYGIFALKKLKEGRGKHFTD     50
                     |::.||||.||||.|::||||||.|.||||..|.||||::|..|...||:
BPUM_2451___y      1 MDEIQSVLYEYGLEAEYIEPVSPAVVKVYTKQGAFALKRVKASRHMQFTE     50

BSNT_04084___     51 HMVAIEEKGFRSFVPVYRTNSGEFFSAGIQYGDTYYLMPWLQFDQEEERD    100
                     .|:.:|.||:|||||:|||.||.|||:..:....|||||||..::.||:|
BPUM_2451___y     51 QMLELESKGYRSFVPIYRTKSGSFFSSHRESQYAYYLMPWLTNEKREEQD    100

BSNT_04084___    101 QKHAYLFRETARLHERTAQELKVRRDEIERYYGQTKKKWEQDKIFYEQFV    150
                     .||.|||:|.||||:||...:.:...|||.:|.|.|.|||.:|..||:|:
BPUM_2451___y    101 DKHEYLFQEIARLHKRTEVMMDITEQEIEAHYTQIKTKWETEKDMYERFI    150

BSNT_04084___    151 DRAEKEWYLSPFELQAITYFSETISAVNFALERLEDWYESAKEKDVSRVV    200
                     :|||:.||:|||||.|..||||.:||..|||||||||:|..|:|:.:|||
BPUM_2451___y    151 ERAEQTWYMSPFELAAAMYFSEAMSASEFALERLEDWHEEMKDKETTRVV    200

BSNT_04084___    201 MNHGSLSIHHFLYNDAGTGYFTNFERASVGPPQNDLLGFYTKMFRGFPKA    250
                     :|||.||||||||||.|||:||||||:....|..|||.||.:.|:.:|.:
BPUM_2451___y    201 LNHGQLSIHHFLYNDVGTGHFTNFERSKKAAPIYDLLTFYFRTFKTYPTS    250

BSNT_04084___    251 CPECVEWFYGYTKSFPLREAEVSLFLSYMAYPAAMYKVLNGYQTGKRQHE    300
                     ||||...||.|.|..||||.|:.|||||:|||..::..:..|:.| .|.|
BPUM_2451___y    251 CPECTSLFYMYQKGNPLREEELHLFLSYLAYPQGLFDTVKTYEAG-GQDE    299

BSNT_04084___    301 KEECTQLLKAYWQMKNIEPFVMKIHQIEQEKKFQAENESTS---    341
                     .|.|.:||:|||||||.||.|||||:|||.::.:.|..::|   
BPUM_2451___y    300 MESCQELLRAYWQMKNSEPTVMKIHEIEQARRLEEEQSASSSAE    343


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