Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04082 and BPUM_2450

See DNA alignment / Visit BSNT_04082 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:35
# Commandline: needle
#    -asequence pep-align/BSNT_04082.1.24716.seq
#    -bsequence pep-align/BPUM_2450.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04082-BPUM_2450.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04082-BPUM_2450.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04082
# 2: BPUM_2450
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 63
# Identity:      42/63 (66.7%)
# Similarity:    52/63 (82.5%)
# Gaps:           1/63 ( 1.6%)
# Score: 241.0
# 
#
#=======================================

BSNT_04082         1 MKKRFSSYSLPPWVRQIRLVSAQVIIPITIFQGIRTIFFPTTFDVLLLAI     50
                      .|:.:.|:||||:||||.|::||::||.||||.|||.||||||||:|.|
BPUM_2450          1 -MKKINPYTLPPWLRQIRAVASQVVLPIAIFQGFRTIIFPTTFDVLILGI     49

BSNT_04082        51 LIFLACALHLEWI     63
                     |||||||.||:|.
BPUM_2450         50 LIFLACAFHLDWF     62


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.