Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04082 and BPUM_2450
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:35
# Commandline: needle
# -asequence dna-align/BSNT_04082.1.24716.seq
# -bsequence dna-align/BPUM_2450.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04082-BPUM_2450.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04082-BPUM_2450.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04082
# 2: BPUM_2450
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 193
# Identity: 128/193 (66.3%)
# Similarity: 128/193 (66.3%)
# Gaps: 5/193 ( 2.6%)
# Score: 378.5
#
#
#=======================================
BSNT_04082 1 GTGAAGAA-ACGTTTCAGCTCTTATTCGCTGCCGCCATGGGTAAGGCAAA 49
.||||||| | |||...|.|||.|.||.||.||.|||.||||.||||
BPUM_2450 1 TTGAAGAAGA----TCAATCCATATACACTTCCCCCCTGGCTAAGACAAA 46
BSNT_04082 50 TTCGGCTTGTATCCGCACAAGTGATTATTCCCATTACGATTTTTCAAGGA 99
|||||...||..||.|.|||||..||.|.||.|||.||||.||||||||.
BPUM_2450 47 TTCGGGCAGTCGCCTCCCAAGTCGTTCTCCCAATTGCGATATTTCAAGGG 96
BSNT_04082 100 ATCAGAACCATTTTCTTTCCGACAACCTTTGATGTTTTGCTGCTCGCAAT 149
.|..|.||.|||.|.||.||.||.||.|||||.||..|..|.||.|..||
BPUM_2450 97 TTTCGTACAATTATTTTCCCCACGACATTTGACGTCCTCATCCTAGGTAT 146
BSNT_04082 150 CCTAATCTTTTTAGCTTGCGCCCTTCATTTAGAATGGATATAA 192
.||.||.|||.|.||.||||||.||||..|.||.|||.|.|||
BPUM_2450 147 TCTCATTTTTCTTGCCTGCGCCTTTCACCTTGATTGGTTTTAA 189
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