Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04074 and BPUM_2446
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:35
# Commandline: needle
# -asequence pep-align/BSNT_04074___spoIIB.1.24716.seq
# -bsequence pep-align/BPUM_2446___spoIIB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04074___spoIIB-BPUM_2446___spoIIB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04074___spoIIB-BPUM_2446___spoIIB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04074___spoIIB
# 2: BPUM_2446___spoIIB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 350
# Identity: 151/350 (43.1%)
# Similarity: 209/350 (59.7%)
# Gaps: 31/350 ( 8.9%)
# Score: 693.5
#
#
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BSNT_04074___ 1 MKKRKNKKNSKAAEKALKVTINGKEETVYEQE-TPETEADKSMTFSNWEE 49
||||:.|| :.|||.||||||.|:|.: .|..:.:..:|||||||
BPUM_2446___s 1 MKKRQAKK------QGLKVNINGKEEMVHEDDHQPPKQQEDQVTFSNWEE 44
BSNT_04074___ 50 KRQAEQEVAASQEHPD---EDEFNWDSEEDKVFKEDPKVVPPFQKKKTKL 96
||.:|||.|||||.|. |::|.||...|.::..|||||.|:||||:..
BPUM_2446___s 45 KRHSEQETAASQEDPSKPKEEDFQWDDAADHIYHSDPKVVTPYQKKKSSF 94
BSNT_04074___ 97 YAK-GKTGAAKPVKRVAATIAFAAVIGTGLGLFALNIS---------GNK 136
..| ||... |.|||..||.||.|:|||||:|||::| |:.
BPUM_2446___s 95 DQKFGKNRG--PFKRVMTTIVFAVVLGTGLGVFALSLSKDSTPNPSGGDI 142
BSNT_04074___ 137 EASAPASLEDS---LGSQTAKAGDTSTDKQTSGTEKQAAQTEGTYKTYAV 183
..||..|...| .|....|||.|...|: .|:.....|:..|:.|
BPUM_2446___s 143 SVSASGSGNQSSMKAGGDAPKAGTTDESKE----NKEEKSASGSLSTFVV 188
BSNT_04074___ 184 QAGKFSNEKGAETLTEQLTEKGYSAVSLSKDDGYTYVIAGLASDKDVSQQ 233
||||||:||||:.|...|.:.||:...:|.|||| |||||||:::.|:..
BPUM_2446___s 189 QAGKFSSEKGADDLVGSLKDAGYAGKKISMDDGY-YVIAGLATEQGVTSA 237
BSNT_04074___ 234 LGQVLIDSDFEAWGGKELSLSIESDMTDSFKETAELAAKAILGEDITKAS 283
:|:.|||..||||||||||..:..::|:..::.:.|::|.|.|:::.:..
BPUM_2446___s 238 VGKKLIDQHFEAWGGKELSFQVPDELTNLIEKASVLSSKVIAGDEVDQKE 287
BSNT_04074___ 284 VEKIEKSLGETKASETGEKKAILQALKELEDPSAEAGWKAQQQLLAVVK- 332
|.::...|...|..:...|.::|:|::.|.||:||.|||:||.||..:.
BPUM_2446___s 288 VTQLISELESAKTEDAPAKSSLLKAVQLLNDPTAENGWKSQQALLDQLNT 337
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