Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04068 and BPUM_2442

See DNA alignment / Visit BSNT_04068 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:34
# Commandline: needle
#    -asequence pep-align/BSNT_04068___mreC.1.24716.seq
#    -bsequence pep-align/BPUM_2442___mreC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04068___mreC-BPUM_2442___mreC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04068___mreC-BPUM_2442___mreC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04068___mreC
# 2: BPUM_2442___mreC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 299
# Identity:     195/299 (65.2%)
# Similarity:   238/299 (79.6%)
# Gaps:           9/299 ( 3.0%)
# Score: 1000.0
# 
#
#=======================================

BSNT_04068___      1 MP----NKRLMLLLLCIIILVAMIGFSLKGGRNTTWPEKVIGDTTGVFQN     46
                     ||    ||||||||:|:|:||||||||:|.||..:||||::|||||.||.
BPUM_2442___m      1 MPQFFMNKRLMLLLVCVIVLVAMIGFSVKSGRGASWPEKLVGDTTGFFQG     50

BSNT_04068___     47 IFHTPAEFFAGIFENINDLKNTYKENERLREKLDGQTQYEAKLQELEEEN     96
                     :||.|::|.||::.|:.||||||.||||||:||||||||||||||||:||
BPUM_2442___m     51 VFHKPSQFIAGMYGNVQDLKNTYDENERLRKKLDGQTQYEAKLQELEDEN    100

BSNT_04068___     97 KSLRDELGHVKSIKDYKPILATVIARSPDNWAKQVTINKGTQQNVAKDMA    146
                     |.||.:||:|.||:||.|||:|||||:|..|...|.|:||.:|.|.||||
BPUM_2442___m    101 KKLRKQLGYVNSIRDYTPILSTVIARNPSLWDSFVMIDKGKKQGVDKDMA    150

BSNT_04068___    147 VTNEKGALIGKIKSSGLNNFTSTVQLLSDTDRNNRVATKISGKKGSKGY-    195
                     ||||.|||||||:|..||||||||:|||.||:|||::|||..|||.:.. 
BPUM_2442___m    151 VTNESGALIGKIESDKLNNFTSTVRLLSSTDQNNRISTKIFAKKGKEELN    200

BSNT_04068___    196 GLIEGYDKEKKRLKMTIIERKDKQDVKKGDLIETSGTGGVFPEGLTIGEV    245
                     |:|.|||.:||.|.|.|::.....|||||||:||||.|||||:|||||:|
BPUM_2442___m    201 GIINGYDSKKKMLTMNILKSDADGDVKKGDLVETSGAGGVFPQGLTIGKV    250

BSNT_04068___    246 TDIESDSYGLTKVAYVKPAADLTDLNNVIVVNRDVPTVD----TEEEGS    290
                     ::||.|.|||||:.||:|||:|.:|:.||||||...|.|    |:||||
BPUM_2442___m    251 SEIEPDHYGLTKIIYVEPAAELNNLDRVIVVNRSSSTADASVLTKEEGS    299


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