Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04064 and BPUM_2440
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:34
# Commandline: needle
# -asequence pep-align/BSNT_04064___minC.1.24716.seq
# -bsequence pep-align/BPUM_2440___minC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04064___minC-BPUM_2440___minC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04064___minC-BPUM_2440___minC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04064___minC
# 2: BPUM_2440___minC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 230
# Identity: 158/230 (68.7%)
# Similarity: 197/230 (85.7%)
# Gaps: 4/230 ( 1.7%)
# Score: 834.0
#
#
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BSNT_04064___ 1 MNIVKTKKQQYVTIKGTKNGLTLHLDDACSFDELLDGLQNMLSIEQYTDG 50
:||:||||||||||||||||.|:|.||||:||.||:.:|.:||||||
BPUM_2440___m 1 ---MKTQKQQYVTIKGTKNGLTLQLNDDCSFDDLLSGLRELLLLEQYTDG 47
BSNT_04064___ 51 K-GQKISVHVKLGNRFLYKEQEEQLTELIASKKDLFVHSIDSEVITKKEA 99
: |.|::||:|||.|:|.::||.:|||.::..:.|.:|||:|:|::.:||
BPUM_2440___m 48 REGHKVNVHIKLGFRYLTEDQEMRLTEAVSENEHLVIHSIESDVMSTEEA 97
BSNT_04064___ 100 QQIREEAEIISVSKIVRSGQVLQVKGDLLLIGDVNPGGTVRAGGNIFVLG 149
::::.||||.||:|||||||||.|:||||||||||||||:||||||||||
BPUM_2440___m 98 KRLKAEAEITSVAKIVRSGQVLYVEGDLLLIGDVNPGGTIRAGGNIFVLG 147
BSNT_04064___ 150 SLKGIAHAGFNGNNQAVIAASEMLPTQLRINHVLNRSPDHIQKGNEMECA 199
:|||:||||.|||.|||||||.|:||||||..|.||:||..:.|||||||
BPUM_2440___m 148 ALKGVAHAGCNGNKQAVIAASRMIPTQLRIAQVFNRAPDQKEDGNEMECA 197
BSNT_04064___ 200 YLDTDGNMVIERLQHLAHLRPDLTRLEGGM 229
|||.||||:|||||.|||:||:||||||||
BPUM_2440___m 198 YLDIDGNMIIERLQQLAHIRPNLTRLEGGM 227
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