Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04064 and BPUM_2440
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:34
# Commandline: needle
# -asequence dna-align/BSNT_04064___minC.1.24716.seq
# -bsequence dna-align/BPUM_2440___minC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04064___minC-BPUM_2440___minC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04064___minC-BPUM_2440___minC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04064___minC
# 2: BPUM_2440___minC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 725
# Identity: 498/725 (68.7%)
# Similarity: 498/725 (68.7%)
# Gaps: 76/725 (10.5%)
# Score: 1662.5
#
#
#=======================================
BSNT_04064___ 1 GTGAATATTGTGAAGAC-CAAAAAGCAGCAATATGTAACAATAAAAGGAA 49
.||||.|| |||||| |||||||||||.||.||||||||.|
BPUM_2440___m 1 ---------TTGAAAACTCAAAAA-CAGCAATATGTGACGATAAAAGGTA 40
BSNT_04064___ 50 CAAAGAATGGACTAACATTGCATCTGGATGATGCGTGTTCTTTTGATGAG 99
|.||.||.|||.|||||||.||..|..||||||..|||||.||||||||.
BPUM_2440___m 41 CTAAAAACGGATTAACATTACAGTTAAATGATGACTGTTCGTTTGATGAC 90
BSNT_04064___ 100 CTTCTCGATGGTCTTCAGA-ATATGCTGTCAATTGAACAATATACCGATG 148
|||||...||| |||..|| |..|.||.|.|.||||.||||||||.||||
BPUM_2440___m 91 CTTCTTTCTGG-CTTGCGAGAGCTTCTTTTACTTGAGCAATATACAGATG 139
BSNT_04064___ 149 GAA---AAGGCCAGAA----AATCAGCGTTCATGTTAAGCTGGGAAATCG 191
||| ||||.||.|| ||| ||.|||.|||||||.||
BPUM_2440___m 140 GAAGGGAAGGTCATAAGGTTAAT----GTGCATATTAAGCTTGG------ 179
BSNT_04064___ 192 CTTTT---TATATAAGGAGCAAGAGGAACAGCTAACCGAA------TTGA 232
|||| |||.||| .||||||.||| ||| ||||
BPUM_2440___m 180 -TTTTCGGTATTTAA-----CAGAGGATCAG------GAAATGCGTTTGA 217
BSNT_04064___ 233 TTG----CGTC-----AAAGAAAGATTTGTTTGTTCATTCTATTGACAGT 273
.|| .||| |||..||.||.|..|..||||.||||||||.|||
BPUM_2440___m 218 CTGAAGCAGTCTCTGAAAATGAACATCTCGTCATTCACTCTATTGAAAGT 267
BSNT_04064___ 274 GAAGTCATTACTAAAAAAGAAGCACAGCAGA-TAAGAGAGGAAGCCGAAA 322
||.|||||..|.|...||||.||..|.| || |||.||..||.|||||||
BPUM_2440___m 268 GACGTCATGTCAACTGAAGAGGCGAAAC-GATTAAAAGCAGAGGCCGAAA 316
BSNT_04064___ 323 TTATTTCTGTTTCAAAAATTGTCCGTTCAGGCCAAGTGCTGCAGGTAAAA 372
|||..|||||..|.||||||||.||.|||||.||.||.|||.|.||..||
BPUM_2440___m 317 TTACCTCTGTAGCCAAAATTGTACGCTCAGGACAGGTACTGTATGTTGAA 366
BSNT_04064___ 373 GGCGACTTGCTCCTGATCGGTGACGTGAATCCCGGCGGAAC-AGTCAGGG 421
||.||..|..|..|.||.||.||.||.|||||.||.||||| |.|| |.|
BPUM_2440___m 367 GGAGATCTCTTATTAATAGGAGATGTCAATCCTGGTGGAACGATTC-GTG 415
BSNT_04064___ 422 CCGGAGGGAACATTTTTGTTCTGGGCTCACTGAAAGGAATCGCGCATGCC 471
|.||.||.||.||||||||.||.|||.|..|.|||||..|.||.|||||.
BPUM_2440___m 416 CAGGGGGAAATATTTTTGTGCTCGGCGCTTTAAAAGGCGTGGCACATGCT 465
BSNT_04064___ 472 GGATTTAATGGAAATAATCAAGCGGTCATCGCCGCCTCTGAAATGCTTCC 521
||||.||||||||||||.|||||.|||||.||.||.|||...|||.||||
BPUM_2440___m 466 GGATGTAATGGAAATAAACAAGCTGTCATTGCGGCATCTCGTATGATTCC 515
BSNT_04064___ 522 GACACAATTAAGAATCAATCATGTGTTAAATCGCTCCCCAGACCACATTC 571
.||.||..|..|.|||...||.|||||.||.||..|.||.|| ||
BPUM_2440___m 516 AACTCAGCTTCGCATCGCACAAGTGTTTAACCGTGCACCGGA------TC 559
BSNT_04064___ 572 AAAAA------GGGAACGAAATGGAATGTGCTTATTTAGATACAGACGGA 615
||||| ||.||.|||||||||||||||||||||||||.|||.||.
BPUM_2440___m 560 AAAAAGAAGATGGAAATGAAATGGAATGTGCTTATTTAGATATAGATGGC 609
BSNT_04064___ 616 AATATGGTCATTGAACGCCTTCAACATTTGGCTCATTTAAGACCTGATCT 665
||.|||.|||||||||||||.||.||.|||||||||.||||||||.||||
BPUM_2440___m 610 AACATGATCATTGAACGCCTGCAGCAATTGGCTCATATAAGACCTAATCT 659
BSNT_04064___ 666 AACAAGGCTTGAGGGAGGAATGTGA 690
.||||||||||||||||||||||||
BPUM_2440___m 660 GACAAGGCTTGAGGGAGGAATGTGA 684
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