Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04063 and BPUM_2439

See DNA alignment / Visit BSNT_04063 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:34
# Commandline: needle
#    -asequence pep-align/BSNT_04063___minD.1.24716.seq
#    -bsequence pep-align/BPUM_2439___minD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04063___minD-BPUM_2439___minD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04063___minD-BPUM_2439___minD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04063___minD
# 2: BPUM_2439___minD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 268
# Identity:     228/268 (85.1%)
# Similarity:   254/268 (94.8%)
# Gaps:           1/268 ( 0.4%)
# Score: 1186.0
# 
#
#=======================================

BSNT_04063___      1 MGEAIVITSGKGGVGKTTTSANLGTALAILGKRVCLVDTDIGLRNLDVVM     50
                     |||||||||||||||||||||||||||||.||:|||||||||||||||||
BPUM_2439___m      1 MGEAIVITSGKGGVGKTTTSANLGTALAIQGKKVCLVDTDIGLRNLDVVM     50

BSNT_04063___     51 GLENRIIYDLVDVVEGRCKMHQALVKDKRFDDLLYLMPAAQTSDKTAVAP    100
                     |||||||||||||||||||:||||||||||:|||||:|||||||||||.|
BPUM_2439___m     51 GLENRIIYDLVDVVEGRCKIHQALVKDKRFEDLLYLLPAAQTSDKTAVEP    100

BSNT_04063___    101 EQIKNMVQELKQEFDYVIIDCPAGIEQGYKNAVSGADKAIVVTTPEISAV    150
                     ||||.::|.|||:||||:||||||||||:|||||||||||||||||||||
BPUM_2439___m    101 EQIKELIQSLKQDFDYVVIDCPAGIEQGFKNAVSGADKAIVVTTPEISAV    150

BSNT_04063___    151 RDADRIIGLLEQEENVEPPRLVVNRIRNHLMKNGDTMDIDEIVQHLSIDL    200
                     |||||||||||||: :|||||:|||||.|:.|:||:||:||:|.||||||
BPUM_2439___m    151 RDADRIIGLLEQED-IEPPRLIVNRIRTHMAKSGDSMDVDEVVHHLSIDL    199

BSNT_04063___    201 LGIVADDDEVIKASNHGEPIAMDPKNRASIAYRNIARRILGESVPLQVLE    250
                     ||||||||:||||||:||||.||.||:.||||||||||:||||||||..|
BPUM_2439___m    200 LGIVADDDDVIKASNNGEPIVMDAKNKVSIAYRNIARRVLGESVPLQSFE    249

BSNT_04063___    251 EQNKGMMAKIKSFFGVRS    268
                     ::||||.||:|:|||||:
BPUM_2439___m    250 DENKGMFAKLKAFFGVRA    267


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