Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04062 and BPUM_2438

See DNA alignment / Visit BSNT_04062 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:34
# Commandline: needle
#    -asequence pep-align/BSNT_04062___spoIVFA.1.24716.seq
#    -bsequence pep-align/BPUM_2438___spoIVFA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04062___spoIVFA-BPUM_2438___spoIVFA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04062___spoIVFA-BPUM_2438___spoIVFA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04062___spoIVFA
# 2: BPUM_2438___spoIVFA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 269
# Identity:     143/269 (53.2%)
# Similarity:   190/269 (70.6%)
# Gaps:          11/269 ( 4.1%)
# Score: 732.5
# 
#
#=======================================

BSNT_04062___      1 MSHRADEIRKRLEKRRK---QLSGSKRFSTQTVSEKQKPPSWVMVTDQEK     47
                      ..|.||.||::.:|||   .::.||:   .|..:|:..|.|||:|::||
BPUM_2438___s      1 -MKRVDEYRKKIAQRRKTKHSVAPSKK---TTFKKKEDIPPWVMLTEEEK     46

BSNT_04062___     48 HGTIPVYE--DNMPTFNGKHPLVKTDSIILKCLLSACLVLVSAIAYKTNI     95
                     |.....:|  .:.|. ..:|||...::.:|||||||.|||::||::|...
BPUM_2438___s     47 HSGSSSFEASSHQPK-KYQHPLFNPNAFVLKCLLSASLVLIAAISFKGQA     95

BSNT_04062___     96 GPVSQIKPAVAKTFETEFQFASASHWFETKFGNPLAFLAPEHKNKEQQIE    145
                     ||..|:||.:.:|||.:||||:|:.|||...|||||||. :.|..::.::
BPUM_2438___s     96 GPFQQLKPIITQTFEQDFQFAAANRWFEKTVGNPLAFLT-DKKEDQKDVQ    144

BSNT_04062___    146 VGKDLIAPASGKVQQDFQDNGEGIKVETSSDKIDSVKEGYVVEVSKDSQT    195
                     ...:|..|||||||:.|..||.|:|||||::.|||:||||||||.|.|.|
BPUM_2438___s    145 ANHELAVPASGKVQESFTQNGAGVKVETSAEAIDSMKEGYVVEVKKKSDT    194

BSNT_04062___    196 GLTVKVQHADNTYSIYGELKDVDVALYDFVDKGKKLGSIKLDDHNKGVYY    245
                     ||||.||||||:||.||:||:.|||||||||||:|:|.|.|||..||.||
BPUM_2438___s    195 GLTVVVQHADNSYSWYGQLKEADVALYDFVDKGEKIGQISLDDQGKGTYY    244

BSNT_04062___    246 FAMKDGDKFIDPIQVITFE    264
                     ||:|..::|||||||:|||
BPUM_2438___s    245 FAIKQNEQFIDPIQVMTFE    263


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