Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04052 and BPUM_2430

See DNA alignment / Visit BSNT_04052 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:33
# Commandline: needle
#    -asequence pep-align/BSNT_04052___pheA.1.24716.seq
#    -bsequence pep-align/BPUM_2430___pheA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04052___pheA-BPUM_2430___pheA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04052___pheA-BPUM_2430___pheA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04052___pheA
# 2: BPUM_2430___pheA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 292
# Identity:     196/292 (67.1%)
# Similarity:   228/292 (78.1%)
# Gaps:           7/292 ( 2.4%)
# Score: 1041.0
# 
#
#=======================================

BSNT_04052___      1 ---MKVGYLGPAATFTHLAVSSCFQNGAEHVAYRTIPECIDAAVAGEVDF     47
                        :.|||.||.||||||||.|||...|...||.|||:|:||...||||.
BPUM_2430___p      1 MKQLTVGYFGPEATFTHLAVCSCFPADAVQRAYATIPQCMDAVSKGEVDL     50

BSNT_04052___     48 AFVPLENALEGSVNLTIDYLIHEQPLPIVGEMTLPIHQHLLVHPSRENAW     97
                     |.|||||||||||||||||||||:.|.||||||.||.||||||||:..:|
BPUM_2430___p     51 AVVPLENALEGSVNLTIDYLIHEEALSIVGEMTAPIRQHLLVHPSKAESW    100

BSNT_04052___     98 KELDKIYSHSHAIAQCHKFLHRHFPSVPYEYANSTGAAAKFVSDHPELNI    147
                     :.||.|.||.|||||||:||.:.:|.:|:....|||.|||::|:|||...
BPUM_2430___p    101 ETLDVIQSHPHAIAQCHQFLKKQYPDIPHRPVESTGYAAKYISEHPEEAA    150

BSNT_04052___    148 GVIANDMAASTYELKIVKRDIQDYRDNHTRFVILSPDENISFEVNSKLSS    197
                     |.|||::||.||.|.|.|:||.||..||||||||..|...||.:|:..||
BPUM_2430___p    151 GAIANEIAAQTYGLTIAKKDIHDYPHNHTRFVILHKDPKASFPMNAGFSS    200

BSNT_04052___    198 RPKTTLMVMLPQDDQSGALHRVLSAFSWRNLNLSKIESRPTKTGLGHYFF    247
                     :||||::|.||:||||||||||||||||||||||||||||||||||||.|
BPUM_2430___p    201 KPKTTIVVSLPKDDQSGALHRVLSAFSWRNLNLSKIESRPTKTGLGHYLF    250

BSNT_04052___    248 IIDIEKAFDDVLIPGAMQELEALGCKVRLLGAYQSYQL----    285
                     ||||||..||||:|||:|||||:||:|:|||:||:|:|    
BPUM_2430___p    251 IIDIEKEMDDVLVPGAIQELEAIGCEVKLLGSYQTYELTNEK    292


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