Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04041 and BPUM_2423
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:32
# Commandline: needle
# -asequence pep-align/BSNT_04041.1.24716.seq
# -bsequence pep-align/BPUM_2423___coxA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04041-BPUM_2423___coxA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04041-BPUM_2423___coxA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04041
# 2: BPUM_2423___coxA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 232
# Identity: 96/232 (41.4%)
# Similarity: 124/232 (53.4%)
# Gaps: 41/232 (17.7%)
# Score: 413.0
#
#
#=======================================
BSNT_04041 1 ----------------------MGKKMTIASLILMTAGLTACGANDNAMN 28
...:.||| |:|:..||||||.||||..
BPUM_2423___c 1 MLKQSLFRAHEIEFVQGVFRLRQKWQKTIA-LVLLPIGLTACGTNDNAGV 49
BSNT_04041 29 DTRNNDNTRPIGYYSNENDADRQGDGIDHDGPVSELMEDQNDGNRNTTNV 78
|||:|.:.:|:||:|| |.||.... ||.||||||||..|.| |||||
BPUM_2423___c 50 DTRHNQSGQPVGYHSN-NRADDNNQ--DHQGPVSELMEGMNGG--NTTNV 94
BSNT_04041 79 NNRDRVTADDRVPLA-TDGTYNNTNNRNMNRNAANNGYDNQENRRLAAKI 127
:.|.|..||||.||| .||.|:: .:.|.:...:.:|||.|||.:.:.||
BPUM_2423___c 95 DYRTRPQADDRTPLAGGDGRYSH-GDMNYHNQMSFSGYDKQENVQRSRKI 143
BSNT_04041 128 ANRVKQVKNVNDTQVMVSDDRVVIAVKSHREFTKSDRDNVVKAARNYANG 177
||||.::.:|.|:||||:|:.|.||:||....|......|.:||..||:|
BPUM_2423___c 144 ANRVNKMNHVADSQVMVTDENVYIAIKSDGRLTSEGISQVEEAATRYADG 193
BSNT_04041 178 RDVQVSTDKGLFRKLHKMNNR----------- 198
|.|||..|:|.|.:...|...
BPUM_2423___c 194 RAVQVIKDEGAFTRFRDMRRTQFETGQTGMTR 225
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