Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04023 and BPUM_2416
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:32
# Commandline: needle
# -asequence pep-align/BSNT_04023___ruvA.1.24716.seq
# -bsequence pep-align/BPUM_2416___ruvA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04023___ruvA-BPUM_2416___ruvA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04023___ruvA-BPUM_2416___ruvA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04023___ruvA
# 2: BPUM_2416___ruvA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 201
# Identity: 164/201 (81.6%)
# Similarity: 183/201 (91.0%)
# Gaps: 0/201 ( 0.0%)
# Score: 858.0
#
#
#=======================================
BSNT_04023___ 1 MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHI 50
||||||||||||.|||:||||||:|||:::||||||:...||||:|||:|
BPUM_2416___r 1 MIEFVKGTIDYVCPQYVVIENGGVGYQVYSPNPFIYQINKQETIYTYHYI 50
BSNT_04023___ 51 REDAFSLYGFSTREEKALFTKLLNVTGIGPKGALAILGSGDPGAVIQAIE 100
:|||||||||.||||||||||||||||||||||||||.||||||||.|||
BPUM_2416___r 51 KEDAFSLYGFQTREEKALFTKLLNVTGIGPKGALAILASGDPGAVISAIE 100
BSNT_04023___ 101 NEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQ 150
.||||||:|||||||||||||||||||||||||||||.||||||:.::.:
BPUM_2416___r 101 REDEAFLIKFPGVGKKTARQIILDLKGKLADVVPEMIGNLFNHEDHIQVE 150
BSNT_04023___ 151 TAETALEEALEALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLL 200
|.:|||:||||||.||||.::|||||.|.||||..|||||||||||||:|
BPUM_2416___r 151 TQQTALDEALEALSVLGYGDREIKKVYPLLKEEKNLTTDQYVKKALQKML 200
BSNT_04023___ 201 K 201
|
BPUM_2416___r 201 K 201
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