Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04022 and BPUM_2415
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:32
# Commandline: needle
# -asequence pep-align/BSNT_04022___ruvB.1.24716.seq
# -bsequence pep-align/BPUM_2415___ruvB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04022___ruvB-BPUM_2415___ruvB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04022___ruvB-BPUM_2415___ruvB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04022___ruvB
# 2: BPUM_2415___ruvB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 334
# Identity: 285/334 (85.3%)
# Similarity: 308/334 (92.2%)
# Gaps: 0/334 ( 0.0%)
# Score: 1454.0
#
#
#=======================================
BSNT_04022___ 1 MDERLVSSEADNHESVIEQSLRPQNLAQYIGQHKVKENLRVFIDAAKMRQ 50
|||||||:|||||||.||||||||.|:|||||.|||:||.|||:||:|||
BPUM_2415___r 1 MDERLVSTEADNHESAIEQSLRPQTLSQYIGQQKVKDNLSVFIEAARMRQ 50
BSNT_04022___ 51 ETLDHVLLYGPPGLGKTTLASIVANEMGVELRTTSGPAIERPGDLAAILT 100
||||||||||||||||||||||:||||.|:||||||||||||||||||||
BPUM_2415___r 51 ETLDHVLLYGPPGLGKTTLASIIANEMNVQLRTTSGPAIERPGDLAAILT 100
BSNT_04022___ 101 ALEPGDVLFIDEIHRLHRSIEEVLYPAMEDFCLDIVIGKGPSARSVRLDL 150
:|||||||||||||||.|||||||||||||||||||||||.:||||||||
BPUM_2415___r 101 SLEPGDVLFIDEIHRLQRSIEEVLYPAMEDFCLDIVIGKGDTARSVRLDL 150
BSNT_04022___ 151 PPFTLVGATTRVGLLTAPLRDRFGVMSRLEYYTQEELADIVTRTADVFEV 200
|||||||||||||||||||||||||.:|||||.|.:||.||:|||::||:
BPUM_2415___r 151 PPFTLVGATTRVGLLTAPLRDRFGVHARLEYYEQRDLAHIVSRTAELFEI 200
BSNT_04022___ 201 EIDKPSALEIARRSRGTPRVANRLLRRVRDFAQVLGDSRITEDISQNALE 250
.||..||.||||||||||||||||||||||||||||:..|||||:::|||
BPUM_2415___r 201 GIDLRSAEEIARRSRGTPRVANRLLRRVRDFAQVLGNHSITEDIAEDALE 250
BSNT_04022___ 251 RLQVDRLGLDHIDHKLLMGMIEKFNGGPVGLDTISATIGEESHTIEDVYE 300
|||||:|||||||||||:.|||||.|||||||||||||||||||||||||
BPUM_2415___r 251 RLQVDKLGLDHIDHKLLLSMIEKFRGGPVGLDTISATIGEESHTIEDVYE 300
BSNT_04022___ 301 PYLLQIGFIQRTPRGRIVTPAVYHHFQMEAPRYD 334
||||||||:|||||||:||...|.|||||.|..|
BPUM_2415___r 301 PYLLQIGFLQRTPRGRVVTREAYEHFQMEVPIRD 334
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